Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1909 |
Symbol | |
ID | 5103296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1856708 |
End bp | 1857205 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507797 |
Product | hypothetical protein |
Protein accession | YP_001191973 |
Protein GI | 146304657 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.566778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACAC CACATAGGGA AGTTCCACAC GTTCCATTTG TGCCGACCCC TGAAAAGGTA GTGCTGAAAA TGCTGGAGGT TGCAAAGGTA GGACCAGAGG ACATTGTTTA TGACCTAGGA TGCGGTGACG GAAGGATAAT AATTGCTGCA GTGAAGAATT TTGGGGCTAA GAAAGCTGTG GGCGTTGACC TAAGCGATGA AAGGCTTAAG GAGGCAGAAC AGAACGCCAT ACAGAACGGA GTTAGGGACA AGATTGAACT CAGGAAGAAC AACTTTCTTG ACGAGAACGT ATCTGATGCC ACTGTGGTTA CTCTCTTCCT GTTGACCAAC GCTAACGAGC TTCTAAAGCC GAAGTTTGAG AAGGAACTTA AACCTGGGAC CAGGGTGGTT TCCCACGAGT TCGAAATGAA GGGCTGGAAG CCCAAGGAAG TAATTAAGGT TGAGGACGGG AACATGCACC ATCTAGTTTA CCTTTACGTT ATTGGTGAGC ATCAATGA
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Protein sequence | MSTPHREVPH VPFVPTPEKV VLKMLEVAKV GPEDIVYDLG CGDGRIIIAA VKNFGAKKAV GVDLSDERLK EAEQNAIQNG VRDKIELRKN NFLDENVSDA TVVTLFLLTN ANELLKPKFE KELKPGTRVV SHEFEMKGWK PKEVIKVEDG NMHHLVYLYV IGEHQ
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