| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1890 |
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| Symbol | |
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| ID | 5103277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1835458 |
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| End bp | 1836531 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507777 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001191954 |
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| Protein GI | 146304638 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.661089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCTG CTATTATTCT AGCTGGAGGA TGGGCCACTA GGTTAAGGCC TTTGAGTTTG
ACAAAGCCAA AGTCCCTCTT TCCAGTTCTC GGGAAGCCTA TAATTGATTA TACGCTCGAT
GCACTAGAAA GGGCCGACAT CAAGGACGTA TATATCTCCT TAAGGGTAAT GGCTGATAAC
ATCATTAAAC ATGTGGAGAG GGGAGGGAAG AAGGTCACCT TTGTTGTGGA GGAGGAACCA
CTTGGCGACT TAGGACCCCT GAAATACATC TCTGAAAAAT ATACCTTAGA CGACGAGGTT
CTAGTGATCT ACGGTGACGT GTACATGGAG GTGGACTTCA AGGAGATCCT CTCGCTTCAC
AGGAGTAATG AGTGCGGTGC AACTATCATG TCAGCTGAGG TGGAGGACCC CCAGAGGTAC
GGGGTCCTCT ACACGGAGGG GGATAGGCTA ATCCAGATCG TGGAGAAACC TTCGAACCCC
CTTTCCAAAC AGATTAATGC AGGAGTTTAC GTCTTTGACA AGAAGCTTTT CTCGATAATA
AACGGAAAGT CGATCGCAAG GCATTTCCTT CCCAAAGTCT TACAACAGAG TTGCGTCTCA
GTTTATAGGT ATCAGGGAGT TTGGGCAGAC ATCGGGATAC CGGCGGATTA TCTCAAGTTA
AACTTTGATC TCCTGAGGAG GAAATATCCC CGTGGCTTTA TCTCGGATAA GGCTAAGGTG
AGCGAGAAAG CCGAGTTAAC TCCTCCCTAT TTTATAATGG AGGATGCAAA GGTGGGAGAG
GTATACTTGG ACTCTAACGC AATACTAGGA AAAGGTTCAG TAGTGGGCAA TGGATCATAC
GTAGGGGAGA GTCTACTCAT GGATAGGGTT GTGGTAGGAG AGAACTCATT TCTGAAGAAC
GTTATCGTGG GAGACAATAG TAAGATAGGG AAATGGAACC ACATCAGGGA GAGGACTATC
CTAGGAGAGG AAGTAGTTAC GGGAGATGGA GTACTTCTAA ATAGGGGAAC AATAATCTTA
CCATATAAGG AAGTCTCAGA TCCAGTTTAC AAGGAGGGCA AGATAATTCT ATGA
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| Protein sequence | MVSAIILAGG WATRLRPLSL TKPKSLFPVL GKPIIDYTLD ALERADIKDV YISLRVMADN
IIKHVERGGK KVTFVVEEEP LGDLGPLKYI SEKYTLDDEV LVIYGDVYME VDFKEILSLH
RSNECGATIM SAEVEDPQRY GVLYTEGDRL IQIVEKPSNP LSKQINAGVY VFDKKLFSII
NGKSIARHFL PKVLQQSCVS VYRYQGVWAD IGIPADYLKL NFDLLRRKYP RGFISDKAKV
SEKAELTPPY FIMEDAKVGE VYLDSNAILG KGSVVGNGSY VGESLLMDRV VVGENSFLKN
VIVGDNSKIG KWNHIRERTI LGEEVVTGDG VLLNRGTIIL PYKEVSDPVY KEGKIIL
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