| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1884 |
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| Symbol | |
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| ID | 5104152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1826309 |
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| End bp | 1828447 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507770 |
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| Product | glutamate synthase (NADPH) GltB2 subunit |
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| Protein accession | YP_001191948 |
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| Protein GI | 146304632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.95621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATAA TAAACAAGTA TTTACCAATC CCTAAACAGA CGGACTCGGA GTTTTGGACA
ATAGACAGGC TAGAGCATAT AAGGCAACTT GCACTTACAG GTGAACCGTA TCAGATCTTC
ACCAGCAGAA GGAACAATTT GAGGATACTG GACAGGGTTG AGTTTAGGGT CGCTGAGACC
AAGATAACAA GGGAGCCCTC AGCAGACACC AGGGTCTCCT TCAGCGGAAT ATCTATGTCC
TCACCCCTAT ACCTAGGCGA CATGTCGTAC GGAGCCCTCA GTGGAACCCC TAACATTGCC
ATTGCGGAGG CGGCTGACAT CACAGGTACG CTCGCTGGAA CCGGAGAGGG CGGACTTCAT
CCAGAGGTAG CGAAACACAA GAGAATATTT GTTCAATGGG CCTCAGCTAG GTTCGGGGTA
GATGTTGACG TTCTAAACGC TGGGCTGGGG GTAGTAATAA AGATAGGCCA GGGGGCCAAG
CCGGGGATTG GCGGACATTT ACCCGGAAGT AAGGTAACCG AGCCGATTTC CAAGACCAGG
AGGATCCCAG TTGGGATGGA CGCGATCTCG CCAGCCCCAC ATCACGACAT TTACTCCATA
GAGGACCTGG GACAGAGAAT TGAGGCGCTA AAGGAGTTAA CGGGCAAGCC TGTCTTCGTA
AAGGTAGCAG CGACTAACTA CATACCCTAC GTGGTCTCAG GAATTGCCAG GATGAAAGCG
GACGGAGTCA TAATTGACGG TCACGGAGCG GGAACAGGAG CCACTCCTGC AGTGATACGG
GACAACGTTG GGATACCCAT AGAGTTGGCT GTATCTTCGG CAGACTCTGT CCTAAAGAGG
GAAGGTCTAA GGGACAACTT CACTATCATT GCTGCTGGAA GAGTGGGAGA TGCAACAGAC
GCAGCGAAGC TGATTGCGCT AGGAGCAGAC GTAGTGAGCG TTGGAACTGG AGCTTTGATT
GCCATGGGTT GCGTCATGGT CCATAAGTGT CACATAGGGT CGTGTCCCAC TGCACTAACT
AACAAGATAG ATGGCACGAG GATAATGGAG ACCGAGTTTG GAACTAAGAT GCTCGTCAAC
TTCGTGAGGG GATTCTCCCT GGAGCTTGCG AACATTCTAG ATAACCTTAA TCTGTCCTCT
GTCTCACAAC TTAAGGGTAG AAGGGATCTA CTTTACGGTT ATGGGCTATC CAGGGACACC
CTGGAGATTC TTGGAATCCG GGGAGAGGTT GAGGAGCTGA ACCCCAAGTT AGGTGAACTT
TGGACCAGGA GAAGAAAGAA CGCCCTTCAT GACCTCATAA ACAAGGGAGA GCCATCACTC
ACCAGCATGG GTAGCACCGC ACCACCTGAC GTTGAGAAAC CAGCTAGGAT CCTCGACTGG
CTTAGGTCCG ACGGCGCACA GGTTACCAGG CCGTCCATTG ACCCCTATAG GGAGGATATT
GATACTAGTT TCCTTCTTAA GGGAGGTGAG CTTTACCTGT CACTGCCCGT AATTTTTGAC
GTGAGCAACT TACCGTTGGA GTATACTCAG GCCTTTGCCT GGGCTTCACT TGCCCTGGGA
ACCCTGGTCT TCTCAGTGGA GACCATTCGT CAATTTGAGG AAGTCTCGCT TTCCTCAGAC
GGAAAGGGAA TTGCTACCTG GTCCACGAAA CCCTCACTGG GCAACTACTT CATCCCGGAA
GACCTCGAGG AGATGGAGGA ACTGGCTAAT GAGGGTGAGG TCCCGGGTTT CATCCTAGAT
GAGGATATCA TGGGGGAGGA CATAGAGCTT GTGATATCGG ATGCGGACCT CAGGCTTAAG
GAAGCTGGAG TAAGGAATAG GTATGACCTA ATAGCCAAGT CCTCAAGGCT CAGGGACTCC
TCGGACGTGT TCAAGCTTGT GGCCCTTGGC GCAGATTCCG TGATCATGCC CTACAGCGTT
CTCGAGGTGG CCATAGGAGA AGGAAGTAAG GGAAACCTAA AGGAGAGAGC CTTTAACCTG
ATCTCGGGAA TGAGGAAGGA GATCGCGCTG TTGGCTGGAT CAGCGGGAAT TTACAGCATT
CAGTCAAGCT TAACTGGAAA CAGGGAACTC CTGAGGGCGG TGAACCTGAA CTCCTACGTC
GCTAGGAGAA TAAGAGTGAG GCAGGCTGGT TCGCTATGA
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| Protein sequence | MLIINKYLPI PKQTDSEFWT IDRLEHIRQL ALTGEPYQIF TSRRNNLRIL DRVEFRVAET
KITREPSADT RVSFSGISMS SPLYLGDMSY GALSGTPNIA IAEAADITGT LAGTGEGGLH
PEVAKHKRIF VQWASARFGV DVDVLNAGLG VVIKIGQGAK PGIGGHLPGS KVTEPISKTR
RIPVGMDAIS PAPHHDIYSI EDLGQRIEAL KELTGKPVFV KVAATNYIPY VVSGIARMKA
DGVIIDGHGA GTGATPAVIR DNVGIPIELA VSSADSVLKR EGLRDNFTII AAGRVGDATD
AAKLIALGAD VVSVGTGALI AMGCVMVHKC HIGSCPTALT NKIDGTRIME TEFGTKMLVN
FVRGFSLELA NILDNLNLSS VSQLKGRRDL LYGYGLSRDT LEILGIRGEV EELNPKLGEL
WTRRRKNALH DLINKGEPSL TSMGSTAPPD VEKPARILDW LRSDGAQVTR PSIDPYREDI
DTSFLLKGGE LYLSLPVIFD VSNLPLEYTQ AFAWASLALG TLVFSVETIR QFEEVSLSSD
GKGIATWSTK PSLGNYFIPE DLEEMEELAN EGEVPGFILD EDIMGEDIEL VISDADLRLK
EAGVRNRYDL IAKSSRLRDS SDVFKLVALG ADSVIMPYSV LEVAIGEGSK GNLKERAFNL
ISGMRKEIAL LAGSAGIYSI QSSLTGNREL LRAVNLNSYV ARRIRVRQAG SL
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