| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1875 |
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| Symbol | aroB |
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| ID | 5104143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1818086 |
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| End bp | 1819132 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507761 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001191939 |
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| Protein GI | 146304623 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.722069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGT TCCGTGAGAA GGTGTGCTGT TCAGATGTGA GCGTGAAAGT TGGTAGGGGG
GCACTCAGGG AGCTGGAGAG CCTTCCAGGG AGGAAGTGCA TAGTTCACCC CAAGTCCTTG
AAGCCAGACG TGAAGGGGGA CCTAGAAATC GCGGTAGAGG ACGGAGAGAA AGGGAAGGAC
CTGAGGAACG CGCTTGAGAT AGTGGATAAA CTCCTGGAAC ACGACTTCAC AAGGGGCGAT
TACCTAGTTG CTGTGGGGGG AGGGACAGTA CTCGACGTGG CGGGCTTCTC AGCCTCAATC
TTCATGCGTG GCCTAAACCT AGTTAACGTT CCCACCACCC TCTTGGGGAT GGTAGACGCA
GGGATCGGTG GAAAGACGGG AGTTAATTAC GGTAAGGCAA AGAACATGAT CGGGACCTTT
TATCAACCCT CACTTATCCT AGATGACCTC TCCTTTCTGG ATACTCTCCC CACGGAGGAG
CTGAGAAGGG GACTCGCGGA GGTTGTGAAG TATGCACTGG TCCTAGATAA GGAACTTTAC
GACTTTCTTT CCTTGAATCA CAGCTCAGTC CTGAACAAGG AGGAATCAGC CCTGGAAAAG
GTAATCTCTT CGTCAGTTAG GGACAAGTTA GCGGTCGTTG CGGAGGACGA GAGGGAGACC
AAGGGAGTGA GGATAGTCCT GAACTTCGGG CATACCATAG GGCATGCAAT CGAGGCTGGC
TCAGATTTCA CGGTTCCTCA CGGTCTCGCA ATATCCGTTG GAATGGTATG TGAGGCTAAG
ATTGCCGAGG AAATGGGCTA CGCTGAGGAG GGAGTGGTTG AGGATGTCCT TTGGTTACTG
CAACTCTTTG GGTTACCCAT CTCCTTGGAG CAACTTAACG CGAAAATTGA TGTGGAGAAG
GCGTTAATTG CCATGACAAA GGACAAGAAG AGGAGAGGGG AAGAAGTCCT CCTACCCTTT
CCCACTAGGA TTGGGAATTG GAGGGGGGTA AGGGTGCCAC TTGAGACCCT TGAGGGTTTC
GCTAAGCAAT GCTTGGGAGG TAATTGA
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| Protein sequence | MIEFREKVCC SDVSVKVGRG ALRELESLPG RKCIVHPKSL KPDVKGDLEI AVEDGEKGKD
LRNALEIVDK LLEHDFTRGD YLVAVGGGTV LDVAGFSASI FMRGLNLVNV PTTLLGMVDA
GIGGKTGVNY GKAKNMIGTF YQPSLILDDL SFLDTLPTEE LRRGLAEVVK YALVLDKELY
DFLSLNHSSV LNKEESALEK VISSSVRDKL AVVAEDERET KGVRIVLNFG HTIGHAIEAG
SDFTVPHGLA ISVGMVCEAK IAEEMGYAEE GVVEDVLWLL QLFGLPISLE QLNAKIDVEK
ALIAMTKDKK RRGEEVLLPF PTRIGNWRGV RVPLETLEGF AKQCLGGN
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