Gene Msed_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1862 
Symbol 
ID5104130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1807896 
End bp1808168 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content50% 
IMG OID640507748 
ProductDNA-directed RNA polymerase, subunit L 
Protein accessionYP_001191926 
Protein GI146304610 
COG category[K] Transcription 
COG ID[COG1761] DNA-directed RNA polymerase, subunit L 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.794833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG CAGTTGAGAG GGAAGAGGAA AATTACCTGG AGTTAAGGAT CCAGGGTGAG 
GATCACACTC TAGGTAACTT AATAGCTGGT AGGCTGAGGA GCGTTAAGGG AGTTATCCTC
GCGACGTACT ACCTGCCTCA TCCGCTTAAG GATGAGCTCG TGATCAAGAT AAAGACAGAT
GGCACGATCT CTCCTAGGGA GGCCCTCAAT AGGGCGATAG AGGACGTAAA GGTTCTTGGA
GAGTCCTTCC TCGACGAGCT GGAACAGGTT TAG
 
Protein sequence
MEIAVEREEE NYLELRIQGE DHTLGNLIAG RLRSVKGVIL ATYYLPHPLK DELVIKIKTD 
GTISPREALN RAIEDVKVLG ESFLDELEQV