| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1758 |
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| Symbol | |
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| ID | 5104758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1694827 |
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| End bp | 1695879 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507653 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001191837 |
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| Protein GI | 146304521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.293188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAC AGGCCTTAGC TTTACTTGAA AGATATCCCC TTTGCGATTC CTGTTTAGGA
AGATGCTTCG CCAAGCTCGG TTACGGTCAC CTTAACAGTG AAAGGGGAAG GGCCATAAAG
CTCTCCCTGC TCCTTGAAAT TGATAGGAGA GTCAAGGAAC ACGAGCTCCC AGATCTAGGG
GAGATGAAGG AGATACTATT TAACATGGGA GAGGTCGGGG AATCACTTTT CTCCCACTAT
TTCGGAACAG GATTTCAGAG GAGATCGTGC TACCTGTGTA ATGATGTCCT CCCCCAGGTA
AAGGAGGACT TTGCCACGAA GGCCCTATCC CTCCTGAGAA CTTCGCCCAT GAAGTATGTC
CTGGGTGTTA GGCTATCCCC CAGAATGCAG GAACTTGAGA CAAGCTTCGC AGTTACGAAT
GGTCTCGTGT ACTACGAGAG CATGAAGGCG GAGATAAGGA GGGAAGTGGG GAAGAGGTTA
TCACAGCTGG GTTTTGAGCC TGAAATCGAT AACCCTGAGG GAGAGCTCGT ATATGATATG
GATTCTAGAA ATGTTGAGGT GATAAGGAAG AGTCAAAAGA CGCTCTACCT ATACACCAGG
CTCTCGAGGG GAGTCCCCAT ATCCTCTTGG TACTCTAAGG GAGGGGACTC GCTAGACAGG
GAGATAGGAA ACAAGATCAT CATCCCCTTC ACTGAGCCAT CTGACGTCCG CATCCTGGAA
CCCTATCCGT TGGTGATTGA GGACTACCAC GAGGAGAGGA AAGAGGTTAT GGGCTACTCC
CTGGTTAGGA CCTCCACATT GGGCAAGAGT GAGTTCAACC TACTCATGGA AAACAAGCCC
TTCTCTAGGA CCTACCGAGT GGTCTTCTAC TCCAGGGAGA GAAAGGGGCA CGAGATATAT
GACGGCATAC AGGACACCAT GATTGAAGCT AGGAACTATG ACGAGCTCAT GGAGAAGGTA
AAGTCCATGA ACGTGGAGAT CATTTCCGTA GACTTGATAA GAACTGAGGG AAAACATAGG
AGAATAAGAG CCCTTTTAAC CAGGGTCGAG TAA
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| Protein sequence | MAEQALALLE RYPLCDSCLG RCFAKLGYGH LNSERGRAIK LSLLLEIDRR VKEHELPDLG
EMKEILFNMG EVGESLFSHY FGTGFQRRSC YLCNDVLPQV KEDFATKALS LLRTSPMKYV
LGVRLSPRMQ ELETSFAVTN GLVYYESMKA EIRREVGKRL SQLGFEPEID NPEGELVYDM
DSRNVEVIRK SQKTLYLYTR LSRGVPISSW YSKGGDSLDR EIGNKIIIPF TEPSDVRILE
PYPLVIEDYH EERKEVMGYS LVRTSTLGKS EFNLLMENKP FSRTYRVVFY SRERKGHEIY
DGIQDTMIEA RNYDELMEKV KSMNVEIISV DLIRTEGKHR RIRALLTRVE
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