| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1583 |
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| Symbol | |
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| ID | 5104028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1531209 |
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| End bp | 1531874 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507469 |
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| Product | DNA-3-methyladenine glycosylase III |
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| Protein accession | YP_001191662 |
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| Protein GI | 146304346 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00807235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00557129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | TTGAATGAAC TCGTTAAGCT CTTTGAGGGG AATAAGGAAG TCATAAGACA CACAGGCTGG
GTTATTACCG ATCCCAAATC CTATGAGTGG TGGGATGGCT TCGATTCAGC CGATAAGATT
GTGATCTCAG CCTTTCTTGT CCAATTGACC AAGTGGGAAT CAGTAAAGAG GGTAATTGGG
ACACTGGAGG AACACGGACT TGCCAAGGTG GACTCCATAG CAGAGCTGGA TCTCCCGACT
TTAGAGAGCT ATTTCAGACC CATCAATTTC TACAGGACTA AGGCTAGAAG GGTTCTGAAC
TTCGCTAAAT TTGTTAAGGA AATGGGTGGT CTAAACAAAG TCCTGTTGCT TGAGAGGAGG
CCTCTACTTC TGACCCAAGA GGGCGTCGGT GAGGAGACCG CTGATTCCAT CCTTCTCTTC
GCGGGTCATC AACCTGTATT CCCAAACACT GAATATTCTA GGAGGGTACT AGGGAGGGTA
ACTGGGCAGG AAATGAAGAA ACGTGACTTA CCCAACTTCG TCTACCATAA TGTTCAACAG
GACCTATACT TGTATAAGAT TTTGCATGCT GGTTTAGGTG CTGTTGGAAA AGCTTTTTGT
TTACTAACCA AGCCTAAGTG TGATAGATGC TTTCTTAAAC AAGTATGCGA ATATAATTAT
AGATAA
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| Protein sequence | MNELVKLFEG NKEVIRHTGW VITDPKSYEW WDGFDSADKI VISAFLVQLT KWESVKRVIG
TLEEHGLAKV DSIAELDLPT LESYFRPINF YRTKARRVLN FAKFVKEMGG LNKVLLLERR
PLLLTQEGVG EETADSILLF AGHQPVFPNT EYSRRVLGRV TGQEMKKRDL PNFVYHNVQQ
DLYLYKILHA GLGAVGKAFC LLTKPKCDRC FLKQVCEYNY R
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