Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1480 |
Symbol | |
ID | 5104727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1448897 |
End bp | 1449991 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507368 |
Product | lipoate-protein ligase |
Protein accession | YP_001191561 |
Protein GI | 146304245 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0095] Lipoate-protein ligase A |
TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.521497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGA GGTTTGTTTC CCTCCCTCCA CAGGACGGCT ATCACATGGT AACTTCCTTC GTGTCAGTTG CTGAGTACGT TACAAGGGGA GGAAAAAACA CATTTCTAGT TTTTTCTGTT AAGGAACCAT TCGTTAACGT TGGAGTTCAT CAGGAGGTTT GGCTGGAGGT AGATCTAGAT TACACCTTGA AGAACAAGAT ACCAGTAGTG AGAAGAGACT TGGGCGGAGG TACTGTGGTC ATAACTCAGG GGGAGCACGA CTATTTTATC GTGTTGAGGC AAGAGGAGGC TCCCTCGGAT CCTAAGGCTC TTTACGAGAA ATTTCTTACA CCCGTAGTTA ACGTGCTCAG GGACTACGGT TTAAACGCTT CTCTAAGGGA CCAGGACATA GTGGTCAATG GGAGAAAGAT TAGCGGGAAT GGAGCCATGA CTCACGGTAA GGCTGTGGTT ATTGCTGGAA ATATTCTCAT GAGGGCTGAC ACACAACTGA TGAGCAAGTG CATCAAGGTC CCCTCCGAGA AGTTCAGGGA TAAAATGGCG AAGGATATGT CGGAATGGAT AACCTCTCTG GAACGAGAGC TCGGATATGT TCCACCTAGG GAGGAACTAG ACAAGAAACT GAAGCAAAGT TTCGAGGCTC ATCTGGGAAT TAAGTTTGAA GATTCCATGT TAACCCCAGA GGAGATTGAA AGATGGGAAC AGTTGGCGAG TGAAAAGAGG AACGAGGAGT GGATTTACTA TAAGGACAGG AGGCATCCCG ATTTAAGGAC CGATAGGTGC GTTAAGATCT CCTCCGCCGT AGCCATATGT CACCTGGATT ATAAGGCCAG AAAACTGGTC AGGATAACCG CGAAGTTCGT GGAGAAGAGA TTACAGGAGG TCTCCATTTC AGGTGATTTC TTCGTAATGT CGCCCAGGGA CTTTATAGAG AAGCTTGAGG ACAGGCTTAG CGGGACCTCG CCTGATGAGA TATCGCAAGT GATTGATAAA GCGTTCTCTG AGTTGAAGCC GGTAATCTTT GGATTTAACG CGGACGACCT AAAGAAGGCG TTCGAAGAGA TACTGAATAA GCCAGAGGTT CAAGAGGTCA CATAA
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Protein sequence | MSWRFVSLPP QDGYHMVTSF VSVAEYVTRG GKNTFLVFSV KEPFVNVGVH QEVWLEVDLD YTLKNKIPVV RRDLGGGTVV ITQGEHDYFI VLRQEEAPSD PKALYEKFLT PVVNVLRDYG LNASLRDQDI VVNGRKISGN GAMTHGKAVV IAGNILMRAD TQLMSKCIKV PSEKFRDKMA KDMSEWITSL ERELGYVPPR EELDKKLKQS FEAHLGIKFE DSMLTPEEIE RWEQLASEKR NEEWIYYKDR RHPDLRTDRC VKISSAVAIC HLDYKARKLV RITAKFVEKR LQEVSISGDF FVMSPRDFIE KLEDRLSGTS PDEISQVIDK AFSELKPVIF GFNADDLKKA FEEILNKPEV QEVT
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