Gene Msed_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1477 
Symbol 
ID5104724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1447100 
End bp1447513 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID640507365 
ProductOsmC family protein 
Protein accessionYP_001191558 
Protein GI146304242 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTT TCACAGCTGA GGCCAAGCTA GAAGGAGAGA CTGCGGTGGT TAGCGTTAAG 
GACTTGGAAC TGAAGATCGG TCTCATTGGA TCGGAGAACC CAACTCCAGA GGAGTTAATG
CTCGGGGCAG CGTTATCCTG CATGATACTC ACGATTTATT ATATTTCAAG GGAAATGGGG
GTCAAGCTTC AGGGAGTGGA GGGTTACATT GAGGGAAACC TGGATCCCAA GGGCTTTCAG
GGTGACCCGA ATGTACCTCC AGGTCTCCTT CAAGTTAAGT ATGACCTCAC AGTCTTCTCA
GATGATGAAA GGATAGGCAA GGTCATGGAA CTGTCTATGA GGAGGTGTCC CTTGAAGGAC
ACTCTCATGA GAAGCGTTGA CGTCGACGTT ACCTGGAAAA TCAGAAAGAC TTAA
 
Protein sequence
MITFTAEAKL EGETAVVSVK DLELKIGLIG SENPTPEELM LGAALSCMIL TIYYISREMG 
VKLQGVEGYI EGNLDPKGFQ GDPNVPPGLL QVKYDLTVFS DDERIGKVME LSMRRCPLKD
TLMRSVDVDV TWKIRKT