Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1359 |
Symbol | |
ID | 5103418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1331219 |
End bp | 1332400 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507248 |
Product | major facilitator transporter |
Protein accession | YP_001191441 |
Protein GI | 146304125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTCGT TCAACTGGCT ACTTCTTTCT AGAGCTCTTA GAAGCATAGG CATAATGTTC GTGACCATAT CGAGTTCCCT TTACCTTTCC ACGCTCGGTC TCTCACCCGT GATAATAGGG TTGGTATTCC TGGGAATGAC CGGCTATATA GCGGGGTTCT CCCTTTCCCT GGGCATGTTA GGGGACAGGG TAGGTTACAA GAAGTCCCTC ATTCTAGGAG ACCTAATTCC AGCGATTGCC CTAATACTCC TTATCTCCAC CAGGAATCCC CTCGTGGTAA TTCCGTCAGC GATAATCACA GGTTTAGGCG GAACCGCAGG GGGAGCTAGG GGGGCCTTCT CCCCTGGATT AACTGCCCTA GTGGCGAGGA ACTGGAAGGA AGACCAAGAA AGGGTAAGGA GATTGGGAAA GCTAACCTCA ATCTCCGCTT TAGCTGGAGC AGGTGGTGGT ATACTGCTGA GCTTTCACGA TTACCTGCCC TTCGGAAACG TGAATGACTT TCGATTCCTC TTTGGGGTAG CTTCTGGTCT TCTTTTCGCC TCTGCCTTAT GTATTCTTAA GGTAGAGGAA AGGAGAGGAG AGAAGAAGAG TACAAAGTTC ATGAGAAAGG GAAGTCTGAG GTACATCTCT AAGGTAATAG TCTCTAACAC CTTATCAGGT GCAGGTGTTG GATTGGCTAT TCCCCTTCTT CCTCTCTGGT TCAATCTACG CTTTCATGCA TCTCCCTTGA TAATAGGGGT TATCTTCACG GGGGCGTCCT TGAGCACCTC CTTAGGGTCC TATATTGCCA CTCGTATCTC GAGAAATCCC CTTAGGTTGG CATCCCTAAC CAGGATAATG AACGGTGGAT TTCTCCTGGC CATGGCAATC TCCCCGTTCC TTCCCCTGGC GGGAGCGCTT TACGTAGTGA GGGGGTTTAA CGCTGGTGTA GGTATGCCCA ATAGGACCGC AATAAACGTA AGAGGGGTCT CAGAGGACGA TTTCGGTACC GCGTCAAGTC TTCAAGGAGT CGCCACACGT CTGTCGCAAA TGAGTTCAGG ATTAAGTGGA TACCTTCTTG AGGAAAGCTT TGCATTACCG CTTGAGGTTG GAGGAGTGAT GCAAGCTCTA GGTGGGATTT TATACTACAC ATTGTTAAGG GGAAAGGAGG AGAGAAGGGA GGAGAAACCT AAGACCGTTT AG
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Protein sequence | MDSFNWLLLS RALRSIGIMF VTISSSLYLS TLGLSPVIIG LVFLGMTGYI AGFSLSLGML GDRVGYKKSL ILGDLIPAIA LILLISTRNP LVVIPSAIIT GLGGTAGGAR GAFSPGLTAL VARNWKEDQE RVRRLGKLTS ISALAGAGGG ILLSFHDYLP FGNVNDFRFL FGVASGLLFA SALCILKVEE RRGEKKSTKF MRKGSLRYIS KVIVSNTLSG AGVGLAIPLL PLWFNLRFHA SPLIIGVIFT GASLSTSLGS YIATRISRNP LRLASLTRIM NGGFLLAMAI SPFLPLAGAL YVVRGFNAGV GMPNRTAINV RGVSEDDFGT ASSLQGVATR LSQMSSGLSG YLLEESFALP LEVGGVMQAL GGILYYTLLR GKEERREEKP KTV
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