Gene Msed_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1337 
Symbol 
ID5103396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1313254 
End bp1313934 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content37% 
IMG OID640507226 
Productchromosome partitioning ATPase 
Protein accessionYP_001191419 
Protein GI146304103 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTA TTGCTGTTGT GAGTCCTAAG GGAGGAGTAG GTAAATCTAC TATTGCTTAC 
TATCTATCTA AATTGCTTAG TAATAAATAT AAAGTTGTAC TTATAGATCG CGATTTAACA
GCAACTATAA GTTCTATTTT CGGAATAAAA ATTGGGTTAT TCAATTATTT GGCAGATGAT
ATAAGTGGCG AATTTGTTTA CGAAGATCGT AACCTCAAGG TTGTATCGCT GGCTAGATTT
CAACCTAGTA ATATTCCATC TCTGGAGAAA TTTTATCCCA TCTATGGTAA TATCTTGAAG
GGTGCAGATA TCGTAATAAC TGATAATTCG CCTGGCGGGA TAGGCGAGAT AGAACTAATG
GAGTATAAGG CCTATTATAA GACCGTGGAG GGATCGGACT CTTATTTCAT CCCTGTCACT
ACTCCAGCCC TTCAACTAGA CCGAGCTTTG GCCTTTGTAG AGGAATATAG AAAAATACTT
AAGCAGATGA TTCCAAAAAT AATATCTCTC GAGATACTGG CTCTTGTGGC TAATATGGTG
AAAAACCAGG ATATAGAAGT TCCTGGAATA AGGGTTATCA AAGTACCTTT CTACAGGGAC
CTACTATATA ATGGCTTTCA GAATTGTGAA CCACCAAAGG AATTGTACGA ATTAGTTGAA
ATAGTGGAGA ATATAATGTG A
 
Protein sequence
MIRIAVVSPK GGVGKSTIAY YLSKLLSNKY KVVLIDRDLT ATISSIFGIK IGLFNYLADD 
ISGEFVYEDR NLKVVSLARF QPSNIPSLEK FYPIYGNILK GADIVITDNS PGGIGEIELM
EYKAYYKTVE GSDSYFIPVT TPALQLDRAL AFVEEYRKIL KQMIPKIISL EILALVANMV
KNQDIEVPGI RVIKVPFYRD LLYNGFQNCE PPKELYELVE IVENIM