Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1274 |
Symbol | |
ID | 5104687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1249872 |
End bp | 1251764 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640507165 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001191358 |
Protein GI | 146304042 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAC AGATTTTGTT CGATTTCTCA GTTATCTATA TTGTAATCAT GATGCTGATA GATTTTTGGA TATTCGGTTA TGTTCTAAGG AAGGAATTTG TGAACCTGAA GGCTATCCTA TTCCTCATCT CAGTTACCCT GATCATGTCA AGCGAGAGTG TCTCCATCGC ATACATCGCT GTTTTACATG GCTCACTTTT TATGGAACCA GTTACCCTAA GTGTAGCATT TACTCCCATG CTCCTTTCCC TTCTAGTAAA ATCTGAAAGA GTTAGCGTGA GGAGAAGCCT GAGGCTTTCA GCAATTCTCT CGATTGCTCT GCTGGTAGAT GAAGTTTCCA TGGGATATCT TTATGGTTCC TTCGCCCCTC AACCAAATCC AATCCTGACG GCAGTAGACA ATCCAGCGTT CGGTCTCATG ATGTTGGGGG ATGGGGTTTA CTTCATGGCA ATCTCCAGAA CTAAGAGCGT GGTGGATTGG TCATTAACCA CGTTCGCCTT GTCCATGGCG TTCATGCCGT CCCTATACCG CGTTGCGGGG GTGGAATTGG TAACCTCCTT AATGTCCTCC CTCATCATGA TAGTGAACAT TGTCATGCTT TACATCATAG AAATGAGACA GACGACCTTG AGGGGACAAT TGGTCTCCAT ATCCCTCGCA TTATTTGATT TTGTTATGAT GCTTGGGCTT TCGTTTTTTG CGGGATTTAA CGATCTATAC GTGATCACCT TGGCCATGCT CATATCCATG GTTTGGTACT TTTTCCTGAT CTTCTTTAAC GTCCCTTCCT CGAGGATACA GATGAAGCTA AGGTATCCAT TCCTTTTTCT AGTTCTGGTA AACTTGGCTG AGCTAGCCAT GGGCTTTGGG GAGAGCGTAT TGGGTTTCAA TCTTACCAAC GCGATCTTTT CTAGTTCCGT GATGCATCAC GGCACTTCCA TGTCGCACTC GGGGATGGCC ATGAGATCGC CCTTCACCAA CCCCTTCTGG TGGTTATTCC CCATTAATCC ATTGACGATG ACAGAGATGT ATCTTCACAA GGGTTTCTTG ATATCCCTCT TCATGACCCC TTTCATGCTC GTAATGAGTA CGACGATGTC ACCATTCTAC GTAATCATGA TGGGGGCGGA GATGTCATTC CTTGTATATC AAAGGTACAA GAGGGTTAAG AGCAGATACC TAAGGAACTG GACGCTCGCA ATACTAGTTG GAGTTCCCAT TTTCGTTGTA TTGATCCCCT ATTACACCAA TTTCTACGTG TTCGGAATGA GCGGTATGAT ATTCCCCGTT ACGTTGGCAA CGTTTGCCCT TTCCCTGGGT GTTATAGTGG TAGCGTCTAT CCTATTCGGT AGGGGAAGTT ACTGCAATCT AGTGTGTATG TCTGCCCATA TGTTCTCCAA CATATTTTAC GAACAGTTTC AGGCCAAGAC CTCATCCAAG ATCTGGGAGT ATGCGAGACG AATCCTGATG ATCCCCATGT TTCTGTTCTT AGGACTCTAC GTTATGCAGG AGTTACATGG TGTTAATTTT CCGCTTGATC CCCTAAACTT CTACGGTATG TTCACCCTAA ACTATGTGTG GTGGTTCTTC TATTTCCTGA CCCCCATATT CGGGACCTAT TCGTGCGCAA GGCAGGGATG GTGTGGTTTT GGAACCTTCA CTGGAATTTT CAACAAGGTA TTATTCAAGA TAAGAGCCAA GAACCTAGAG ACGTGCAGGA CTTGTTCCAC AAAGAATTGC GATTCCTCAT GCCCAGTAAA AATCCCCGTA AGCCAGGACA TCATTAGGCA GGGCTACACC AACAGGGTAA GTTGCGTGGG ATGTGCGAGA TGTGTCGAGG TCTGCCCACA CGAGAACCTT GAAGTAAGAA ACATCCTCTC CTTGCTCAAG TAA
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Protein sequence | MTIQILFDFS VIYIVIMMLI DFWIFGYVLR KEFVNLKAIL FLISVTLIMS SESVSIAYIA VLHGSLFMEP VTLSVAFTPM LLSLLVKSER VSVRRSLRLS AILSIALLVD EVSMGYLYGS FAPQPNPILT AVDNPAFGLM MLGDGVYFMA ISRTKSVVDW SLTTFALSMA FMPSLYRVAG VELVTSLMSS LIMIVNIVML YIIEMRQTTL RGQLVSISLA LFDFVMMLGL SFFAGFNDLY VITLAMLISM VWYFFLIFFN VPSSRIQMKL RYPFLFLVLV NLAELAMGFG ESVLGFNLTN AIFSSSVMHH GTSMSHSGMA MRSPFTNPFW WLFPINPLTM TEMYLHKGFL ISLFMTPFML VMSTTMSPFY VIMMGAEMSF LVYQRYKRVK SRYLRNWTLA ILVGVPIFVV LIPYYTNFYV FGMSGMIFPV TLATFALSLG VIVVASILFG RGSYCNLVCM SAHMFSNIFY EQFQAKTSSK IWEYARRILM IPMFLFLGLY VMQELHGVNF PLDPLNFYGM FTLNYVWWFF YFLTPIFGTY SCARQGWCGF GTFTGIFNKV LFKIRAKNLE TCRTCSTKNC DSSCPVKIPV SQDIIRQGYT NRVSCVGCAR CVEVCPHENL EVRNILSLLK
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