Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1132 |
Symbol | |
ID | 5103481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1063190 |
End bp | 1064266 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640507025 |
Product | hypothetical protein |
Protein accession | YP_001191218 |
Protein GI | 146303902 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0249333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.954197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAC TGGTCCTGAA AAACTTTCGA CGGTTCCGTT CACTTGAACT TGAGCTAAAC AAGATCAACG TCATTGTTGG GAAAAACAAC GTGGGGAAGA CCACTATCCT CGAGGCTTTT GCACTGGCAG CCTCTGCACC CTATCTCACT GACTCGCTGG GCTCATCGAT TTTCAGGTCA ATATTGCTCA ATAGGGAGAT ACCCTACTAT CTTGAATTTG TGAAACTAGG AGCCAAAAAA GCGGAGGTTA CCCTAGGCGA TAAGAAGGTA GAAATAGTGA AAGAGCTAGA GAATGAAATC CTTAGGAAGA AAATCTCTGA TGAAAAGGAG AAAGAAAAAG GATTGCAGGT CCTTGACGCA CTGAAGTACA TGATATCTGC GTTAGTCGAG GAGATGCCAG AGGTAGAGCA TCCCGAGTAC TCAAGCACAT ACGCCTTAGC TAAGCATGGT GAACAGATGG TTAGCCATTA CGTGGAGGTA GATATGGGAT CAATAAACAT CTTTAGACAC ATTAATGACA GTTCAAGCGA ACTTAAGCCC TCGCCCGTCT ACTTCGTAAC CGATCATATG TTTTATTCCA CCAAGGCACT TGCATACATA ATAAATAACT CTATTAAAAA TGATTACAAA TACTTTACTA AAGTATTGAC CTCATTTAAA AAGTACATGA AGGAATTTGA TATTGAGGAT GTGAGGGTAG TTGAAAACCA AGTTTATCTT ATCATTAAGG GTAAACCCAT ACCCATCAGT CAAATAGGCT CAGGTGCCAA GAGAGCGCTT TTGAAGGAAC TGATTTCAGG AAACGCTGAA TATATAGCCA TGGACACGCC TGAGAATGAC CTTCATCCAG GATTGTTGAG ATCCTTCCTG GATCAGATAG TGGACCTAAG GGCAAAACTC CTTATATCCA CCCACAGCTT AGACACTATC GAGGCACTGG TTGACGTGCT GGAAATCAAG AGGGCGATTG ATGATATGAC CGTGTTTAGG CTGGATATGA ATGGGGTTGA GACCATACCC GGAAGGGAGG TCATGATACG TCTCAAGGAC ATTGGGGAGG ACCTGAGAGG ACTATGA
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Protein sequence | MEKLVLKNFR RFRSLELELN KINVIVGKNN VGKTTILEAF ALAASAPYLT DSLGSSIFRS ILLNREIPYY LEFVKLGAKK AEVTLGDKKV EIVKELENEI LRKKISDEKE KEKGLQVLDA LKYMISALVE EMPEVEHPEY SSTYALAKHG EQMVSHYVEV DMGSINIFRH INDSSSELKP SPVYFVTDHM FYSTKALAYI INNSIKNDYK YFTKVLTSFK KYMKEFDIED VRVVENQVYL IIKGKPIPIS QIGSGAKRAL LKELISGNAE YIAMDTPEND LHPGLLRSFL DQIVDLRAKL LISTHSLDTI EALVDVLEIK RAIDDMTVFR LDMNGVETIP GREVMIRLKD IGEDLRGL
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