Gene Msed_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1078 
Symbol 
ID5104459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1006078 
End bp1006809 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content44% 
IMG OID640506973 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001191166 
Protein GI146303850 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCAT ATAATACCCT TAACGAACTT ACTCAAGATG TCAAGAATAG GATAAGCAGT 
CTTTATGCCA AAGATCCGTT GACTTACGCC TACCCCTACT ACGATCTAAT TACTCCAGAG
GAAGCCGTGA GGACATCCCT GATCATGGAT AAGGATTCCA TGGTACTTAT TTGGAAAGGC
CTTGGAAGAA ACGATATCTT GATCTACGGA GATGCGGTAA AACTGATCCC TGACGTGGAG
GTACACAATA TTCAAACGTA TAACCTTGAG AATGTTGATC TCATCTCAAG TAGGTTTCCA
TGGCTCAAGG CCACGAGATA TATTGACATG GTATGTGAAT CTCCAGAGCC TAGCGCAGTT
GTGACTAGGT TGAGAGATGA GGATCTGGAC ATGCTTGTCA AGGTCAGGGA AATCTCCACG
GGAATGATTT CATACGAGAG AGCCAATAGG TTGATAGGGA AAACCTTTGG AGTCAAGATA
GATGGTAAAC TAGTTTCCAT TGGAAGTTTC CTAGTTAAGT TACCGGAGGT ATGGATCATA
GGAGGAGTCT TCACATTGCC AGAGTATAGA GGAAGGGGTT ACGCGGGAGA GATAGTGAAG
GCAATGGCGT GGGAGGCTAG AAGCAACGGA GCTATTCCCC TGTTACATGT TAGGGAAGAT
AACATTCCTG CCATAAGGTC TTACTCCAGA GTTGGATGTA GGGAGATAAG GAGAAGATGG
TGGTTAATCT GA
 
Protein sequence
MYSYNTLNEL TQDVKNRISS LYAKDPLTYA YPYYDLITPE EAVRTSLIMD KDSMVLIWKG 
LGRNDILIYG DAVKLIPDVE VHNIQTYNLE NVDLISSRFP WLKATRYIDM VCESPEPSAV
VTRLRDEDLD MLVKVREIST GMISYERANR LIGKTFGVKI DGKLVSIGSF LVKLPEVWII
GGVFTLPEYR GRGYAGEIVK AMAWEARSNG AIPLLHVRED NIPAIRSYSR VGCREIRRRW
WLI