| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1046 |
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| Symbol | |
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| ID | 5104428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 973665 |
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| End bp | 975692 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506942 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001191135 |
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| Protein GI | 146303819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GAAAAGGTAT AAGTCGCACG TTGGTAGCAG GTATAATTGT GGTAATTGTT
ATAATAGCTG CAGTGGCGTT TATTTCCCTA TCAAGACATC CCACAACAAC TACCCCAGTC
AACGTGACCC ATACCACTAA CACGACCACC ACTAAGACTA ACGTGACTGT GCCCACAACG
AATGTCACAT CGATTCCCTC ATCAATTACA GTAGACGAGG CAACTCCGCC AGTTAGCGTG
GATCCGGCGT CCAGTTTTGA CGTTGCTGGG GGAGAATTGC TACAGAACGT GTATCAAACC
CTCGTGTTCT ACAACGGAAC TAATACGTCC AGTTTTGTGG GAGTCTTGGC AGAAAATTAC
ACAGTATTGA ACAACGGAAC CACTTACGTG TTCCACCTCT GGCCATTTAT AACCTTCAGC
AATGGTGATC CATTGAACGC AACCGACGTC TGGTTCTCGG TGTACAGAAC AATGTTAATG
AATCTTGGAA TCTCGGTCTA CGTTAGTCAA GGACTATCAG TCAATAACGG ACTTGGATTT
GTAGGGAAGC TACCCAGTGG CGCTACCGGG ACTATCGAAT TGCCCAACGG TACTCTTCAG
GCCCTCGAAT ATGCTGGTTA CACTTTCCCC TCAAACAAAA CTCAGGCATA CGAACAGGCA
GCCTATGATT TGGCCTATAT TCTTTCCCAC TTCAATGTAA GCAATCAGAC CATTCAAAAG
GTCATGAGTT ATCCCTATCA GGCAGTGGTC GTGGTGAATC CCTATACTGT TCAATTCAAC
CTTCAGTATC CATACTCTGC ATTCCTAGCT GCAATTTCCA CATCTGCTGG AGCCGTAGTT
GATCCAGTCT TCGTAGACGA ACATGGAGGA GTCCAGATAG ATACTGCCAA CACTTACCTT
TCAACTCACG CCCTAGGCTC AGGTCCCTAC ATGTTGGAAA CTCCACTGGG TCAGTCCTAC
GTAATCCTGC AGGCAAATCC CAATTACTGG GCGTCCAAGG TTCCTCAGTC TGAGAGAAAC
TTCATGTTAG CTATTCCCAA GATCGAGACC ATCGTAATAG ATTATCAGAC CAACGAGGCA
CTTAGGATAA GCGACCTTCA ATCCGGGAAG GCCCAAATAG CCCAGATAGA TATTATAGAC
TTACCCCAGA TAATTGGCTC GCAGGGGATT TCCTACATAA GGACCCATAC ACATTATCCT
ATCATGTATA ATGGAACCTA TGGGACAGTC TATGTTTGGG GACCATCCCC GCAGATTGAC
TTCTTGGCAA TAGATGCTTA CCAGTATCCG TTCAACATCA CCAATGTGAG GCTTGCCATC
GCGCATGCCA TAAATGCTAC GCAGATTCAA CAACAGGTCT ACGACGGATT AGCCCTAAGC
TATGTTGGTC CCAATGATCC GTCCCTTCCC TTCTACAACT CCTCGATTCA AGGCTATACC
TATGACCCCG CCCTTTCCAT AAATCTGCTG ACCCAAGCAG GATTTAGCTT AACCCTTCCC
AACGGCACAA CGGTTAACCC AGGTGGAACG CCCTTCCCAA CCATAGTTTT GACCTACCAG
ACAGGTAGCA CGGCACTTCA AGATGAGGCC CTCATTATAC AGCAGCAGTT AGCTCAGATA
GGAATAAAGG TCCAGTTAAA CCCCGAGTCC ACAGTTACCA TTGTAGAGTC CTACCTCAAC
CCACCCAATT CCAGCAGCTA TCCAGCCTTC CAGCTTGCAG CTAACTTCCC ACCTGTCCTC
AGCCCCATTG ATCCTGCCAT CTACCTAATG TCTCAGGCGA GGCTTCACCA CGGCAATCCT
GCTTTCGTCG ATAATCCAGA GATAAACTCT CTCATAATTC AAGCAGTGAG GACTGATAAT
CCAGTTCAGC TCCAGAAAAT CTTCAATGAG ATAACAGAAC TCTCGCTACA GCAGGCCCAA
TACGTATGGC TCGATGACTT CATCGCATAT ACAGTGACTG TCCATGGAAT TCAAGGAATA
TATTACAGTC CAGGGTTTGA CGGATTGTTC TACGCAACAA TATACTAG
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| Protein sequence | MKLRKGISRT LVAGIIVVIV IIAAVAFISL SRHPTTTTPV NVTHTTNTTT TKTNVTVPTT
NVTSIPSSIT VDEATPPVSV DPASSFDVAG GELLQNVYQT LVFYNGTNTS SFVGVLAENY
TVLNNGTTYV FHLWPFITFS NGDPLNATDV WFSVYRTMLM NLGISVYVSQ GLSVNNGLGF
VGKLPSGATG TIELPNGTLQ ALEYAGYTFP SNKTQAYEQA AYDLAYILSH FNVSNQTIQK
VMSYPYQAVV VVNPYTVQFN LQYPYSAFLA AISTSAGAVV DPVFVDEHGG VQIDTANTYL
STHALGSGPY MLETPLGQSY VILQANPNYW ASKVPQSERN FMLAIPKIET IVIDYQTNEA
LRISDLQSGK AQIAQIDIID LPQIIGSQGI SYIRTHTHYP IMYNGTYGTV YVWGPSPQID
FLAIDAYQYP FNITNVRLAI AHAINATQIQ QQVYDGLALS YVGPNDPSLP FYNSSIQGYT
YDPALSINLL TQAGFSLTLP NGTTVNPGGT PFPTIVLTYQ TGSTALQDEA LIIQQQLAQI
GIKVQLNPES TVTIVESYLN PPNSSSYPAF QLAANFPPVL SPIDPAIYLM SQARLHHGNP
AFVDNPEINS LIIQAVRTDN PVQLQKIFNE ITELSLQQAQ YVWLDDFIAY TVTVHGIQGI
YYSPGFDGLF YATIY
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