Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0984 |
Symbol | |
ID | 5104534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 908145 |
End bp | 908951 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506884 |
Product | amidohydrolase 2 |
Protein accession | YP_001191077 |
Protein GI | 146303761 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.127508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGC GGGTAGTTGA CGTCCACGTG CACTACCATA TTTTCCTTAG GAAACTTCCG GATCATTGCA GACAATTCCT TCAAAACGTG GAAGATACGA AGTTCACGCT CAACTTCAAG GACGTCACTG TGGAGAAAGT ACTTCTAGTT CCCTCTCATC CTTGCTGGAG TGAGGAGTGT TCCGACGGGT TCGATCTTGA TTACGAGATC AGAAAGGGGA GCGAACTTTT CCATCAGTGG GGAGAGGTGA ATCCTGTGAC CTGTAACGTG GAGCAGGAAC TTGAGAGGCA ATACTCCCTT GGCATTGTGG GAATTAAGTT ACACCCAGTT CACCACGGCT TTTCTCCCAA CGCCTATAGA CCAGAGGAGG ATGGGGACAG GAGGCTTGAG TTCATTTACT CGTTTGCGGA GGAGAAGAAA CTCCCTATCC TGATCCACAC GGGGACTAGC ATTGGGGTTA AGGCTAGGAA CAAGTATGGC GATCCTATCC TTGTGGATGA CGTGGTGAAG GACTTTGATG TTACACTGAT CCTAGCTCAT GCTGGGAGAC CCCTATGGTA TGATACGGCA TTCTACCTTG CCAGGAATTA CTCTAACGTG TTTCTAGAGA TTTCGTCTAT TCCTCCCAGA AATCTCCTAA AGGCGTTACC CAGATTGTTG GAGATAGAGG ATAAGGTTCT CTATGGGAGC GATTTCCCCG CGTTTAGGGG TCAGGATCTG GCAGTTCACG CGTGGCAGGT GTACCAGGAA TTAAATAGTG GGAAAATAAT GGGGGATAAC GCCAGGAGGG TACTTAGACT TAGTTGA
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Protein sequence | MAMRVVDVHV HYHIFLRKLP DHCRQFLQNV EDTKFTLNFK DVTVEKVLLV PSHPCWSEEC SDGFDLDYEI RKGSELFHQW GEVNPVTCNV EQELERQYSL GIVGIKLHPV HHGFSPNAYR PEEDGDRRLE FIYSFAEEKK LPILIHTGTS IGVKARNKYG DPILVDDVVK DFDVTLILAH AGRPLWYDTA FYLARNYSNV FLEISSIPPR NLLKALPRLL EIEDKVLYGS DFPAFRGQDL AVHAWQVYQE LNSGKIMGDN ARRVLRLS
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