Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0956 |
Symbol | |
ID | 5104508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 882521 |
End bp | 883291 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640506858 |
Product | chromosome partitioning ATPase |
Protein accession | YP_001191051 |
Protein GI | 146303735 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0593249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCTTT CAATACGTAG CTCAAAGGGT GGAGTTGGTA AGTCCACTGT TGCGATATCG CTTGCTAAGG TCTTCGCGTC TGAAGGACAT CACGTACTTC TCATGGATAG GGACATCGTA GGTTATGCGT CCTACCTTGC TGGGATAAAC GGGCCGGGGT TAGTAGCCAG CCTTGCGGAT GGTAAAGACG TTGACGTCAT CAGAGAATTC CCAATAGGGA GAGGGAGCAT CACAATTCTA AAGTACTTTG GGGACGGGCC TAGGTTTAGA CCAGATCTGG AGAAAATACA TAAGGATAAG GACTTGATGA ATCTTGGATG GAAGTACTAC AACGAATTTT TGACTAGGAG GAAATACTCC TGCTTTATAG TTGATAATGC TCCCATGGTC ATGCCCAATG ACGAGATTAA TGTCTACGAA CATAGGCAGT TTAGATCTTT GTTTCCAAAC GTTCCACTGA GATATCTAAT TGTATCAGAT AGTTTAACTC AGACCATTGA GGATAACGTG AGATACTCTA AGGCCATAGA GTCTCCAGAA CAGCAGATCC TGGGTTTCAT CATAAACATG ATTAAACCGC AGGATCTAAA AAAGTATGAA GACGTTATAA GAAAAGTAAT AAATGAGCTA GAATGTAGAA TTGGAGTCTT GATGCCCTTT AACGAGGAGC TCTTTCAGTT TAGCGGTAGT ATAGAAGATT TCCCAGTTCC ACAGCAGATG AAGGAACTGG CAAAGCGTAT AAAGACCGAA GAGCACGGCA TTATAGCGTA A
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Protein sequence | MRLSIRSSKG GVGKSTVAIS LAKVFASEGH HVLLMDRDIV GYASYLAGIN GPGLVASLAD GKDVDVIREF PIGRGSITIL KYFGDGPRFR PDLEKIHKDK DLMNLGWKYY NEFLTRRKYS CFIVDNAPMV MPNDEINVYE HRQFRSLFPN VPLRYLIVSD SLTQTIEDNV RYSKAIESPE QQILGFIINM IKPQDLKKYE DVIRKVINEL ECRIGVLMPF NEELFQFSGS IEDFPVPQQM KELAKRIKTE EHGIIA
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