Gene Msed_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0956 
Symbol 
ID5104508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp882521 
End bp883291 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content43% 
IMG OID640506858 
Productchromosome partitioning ATPase 
Protein accessionYP_001191051 
Protein GI146303735 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0593249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCTTT CAATACGTAG CTCAAAGGGT GGAGTTGGTA AGTCCACTGT TGCGATATCG 
CTTGCTAAGG TCTTCGCGTC TGAAGGACAT CACGTACTTC TCATGGATAG GGACATCGTA
GGTTATGCGT CCTACCTTGC TGGGATAAAC GGGCCGGGGT TAGTAGCCAG CCTTGCGGAT
GGTAAAGACG TTGACGTCAT CAGAGAATTC CCAATAGGGA GAGGGAGCAT CACAATTCTA
AAGTACTTTG GGGACGGGCC TAGGTTTAGA CCAGATCTGG AGAAAATACA TAAGGATAAG
GACTTGATGA ATCTTGGATG GAAGTACTAC AACGAATTTT TGACTAGGAG GAAATACTCC
TGCTTTATAG TTGATAATGC TCCCATGGTC ATGCCCAATG ACGAGATTAA TGTCTACGAA
CATAGGCAGT TTAGATCTTT GTTTCCAAAC GTTCCACTGA GATATCTAAT TGTATCAGAT
AGTTTAACTC AGACCATTGA GGATAACGTG AGATACTCTA AGGCCATAGA GTCTCCAGAA
CAGCAGATCC TGGGTTTCAT CATAAACATG ATTAAACCGC AGGATCTAAA AAAGTATGAA
GACGTTATAA GAAAAGTAAT AAATGAGCTA GAATGTAGAA TTGGAGTCTT GATGCCCTTT
AACGAGGAGC TCTTTCAGTT TAGCGGTAGT ATAGAAGATT TCCCAGTTCC ACAGCAGATG
AAGGAACTGG CAAAGCGTAT AAAGACCGAA GAGCACGGCA TTATAGCGTA A
 
Protein sequence
MRLSIRSSKG GVGKSTVAIS LAKVFASEGH HVLLMDRDIV GYASYLAGIN GPGLVASLAD 
GKDVDVIREF PIGRGSITIL KYFGDGPRFR PDLEKIHKDK DLMNLGWKYY NEFLTRRKYS
CFIVDNAPMV MPNDEINVYE HRQFRSLFPN VPLRYLIVSD SLTQTIEDNV RYSKAIESPE
QQILGFIINM IKPQDLKKYE DVIRKVINEL ECRIGVLMPF NEELFQFSGS IEDFPVPQQM
KELAKRIKTE EHGIIA