| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0896 |
|---|
| Symbol | |
|---|
| ID | 5103542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 830532 |
|---|
| End bp | 831626 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640506799 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190992 |
|---|
| Protein GI | 146303676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCA CTGCCGATCC CTCCACGTTC AGGGGCACTT GGCGTCGGCT AAGGTACCCT
CCCTACGGGC TGAGGAAAGT CGAGTCGATC TCCGGAGGTA AGATAGTGCC CCCAGAGCAA
CTGGGGAAAT ATCGTAACGA GATACTAGGC CTTTACGTGA ACGATCCGCT GGGTCAATCG
GAGATCGGTA AGGCAATATC CTACGTTATT CAGGACGATC CTCCCTACGT GAAGTCCTTC
AAGCTCTTTG GGAGGAGATT GAGGGAGATC AAGGAGAGGA ATTCCCTGAA GGTTGTGGTT
GGGGGACCCG GGGCATGGCA ACTCACGGGT AAGGATTGGA TTGACTCCAT ACTCATTGGA
GAGGCCGAGG AGAACCTGGA GGAGGCCTTG AAGGGGAGTG GGATAATTTA CGGGAGGAAG
GCTGAACATT TCGTTGCAAT AAGGGCACCC TCAGGACTAG CGGAAGTTGA GGTGAACAGG
GGGAATAGAA GAGTGCCCGA GCACGTGATC GAGGAGGAGA TGAGAATACA GGGTTTGGCC
CACGGAAAGG TTAATCTGAT CACGACTGAC CTCCTGAGCT ACGGGGAGGA GAGGGAAGTG
GTGAACCTTC TGCTCAGAGC CAGGAGATTC GGGGAGGTCA CCTTCTCCAA CCTGAACTCG
TTGACGGCAA TGAACTTCGA TCTGGGAAAG ATTAGGGAGG CCTTGAACCT CAATGAGAAC
CATTGGATCT CACCCGTCCT CAACAGCGTC CAGGGATCCT GCGTGTACTC CCTTGAGGCA
GAGGTGCTGA AGTCCCTGAA TAAAAACTAC ATTTACCCCA TGGTTTACGT TGATGAGGAA
AGGGCCGACG AGTTCCTGGA GTATAGGGCC ATAATCGTGC CACTTCCCAA AACTGAGAGG
TATTACGAGG TCCTGTACAG GGTTTGGCAA CACGACAGGA CCCTGGTGAA GGTACCCTTC
TCGTACGTGG TAGATTACGT CCTGAGAAAG GCCGTGGAAA CGAGGGGAGA GAATCTGAGG
AGATTGAACA GGCTTAATCT GGTTAAGGAC CTGTTCTCGG CGTCCTTCTT CAGGTTAGTC
CAGTTTGTAA GCTAG
|
|---|
| Protein sequence | MILTADPSTF RGTWRRLRYP PYGLRKVESI SGGKIVPPEQ LGKYRNEILG LYVNDPLGQS
EIGKAISYVI QDDPPYVKSF KLFGRRLREI KERNSLKVVV GGPGAWQLTG KDWIDSILIG
EAEENLEEAL KGSGIIYGRK AEHFVAIRAP SGLAEVEVNR GNRRVPEHVI EEEMRIQGLA
HGKVNLITTD LLSYGEEREV VNLLLRARRF GEVTFSNLNS LTAMNFDLGK IREALNLNEN
HWISPVLNSV QGSCVYSLEA EVLKSLNKNY IYPMVYVDEE RADEFLEYRA IIVPLPKTER
YYEVLYRVWQ HDRTLVKVPF SYVVDYVLRK AVETRGENLR RLNRLNLVKD LFSASFFRLV
QFVS
|
|---|
| |