| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0838 |
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| Symbol | |
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| ID | 5104264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 767591 |
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| End bp | 768430 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640506742 |
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| Product | signal transduction protein |
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| Protein accession | YP_001190936 |
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| Protein GI | 146303620 |
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| COG category | [K] Transcription
[R] General function prediction only |
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| COG ID | [COG0517] FOG: CBS domain
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.545659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGTTA AAACGCTCAT GAACCCAAAT CCCCCCATAA TCTCAGTTAG TGACGGACTC
AAGGAGGCCT TTAAGAAGGT TAACGACAGG GGGCTAGGCA GGGTCATAGT GGCAGACGAG
GTTGTGAAGG GTATCCTTTC CACAAGGGAC CTCCTCTCAA TTCTCCTCAG CTTCTGTCCC
TCAGCTTGCA CGCAGGCTGA CCTTTACAAG ATGGGAGTTA CCCCAGCCTC AGGCTACATG
ACCGTGAATC CTATGACCGT TGCAGAGGAC CAGGACGCCC TTGAGGCAAT CACAATCATG
GTGACCAGGA ACTTTGGGTC TCTCCCTGTG GTCAATGCCT CACGTAGGCC TGTGGGGATG
GTCACGGAGA GGGACTTTCT CCTCATGTTT CAGGACCTTG ACCCCATGTT TTCCGTGTCG
GGTTTCGTCA CCCCTAGAGT GAATACTGTG TTTCGAGACA CCCTACTGGA ACAGGCAGTT
AGGATGATGC TGAGGAGGGG GTTCAGGAGA CTTCCAGTGA CTGACGAGGA TGGAAAAGTA
GTTGGCATGG TAACTGCAGC TGACGCGGTG AAGGCAGCAG CGAAGGCCGT CGAGAAACTT
GAACCGGAGC TCTTCTTCGG GAGGAGGATA AGGGATATCA TGAAAACTCC AGTGGTAACG
GTGGAAGAGG ACAGGTCAGT CAACGAGGCA GCTGCGCTCA TGATCACGAA GGGGATCGGG
GCCCTGGTTC TCCTGGACAA GGAGGGAAGG GCTAAGGGGA TTGTGACCGA GAGGGACCTG
CTCATCGCCC TTCACTACCA ACTCCATCTT CCCTTCGTCA AGGGTAAGAG TCACGCATGA
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| Protein sequence | MIVKTLMNPN PPIISVSDGL KEAFKKVNDR GLGRVIVADE VVKGILSTRD LLSILLSFCP
SACTQADLYK MGVTPASGYM TVNPMTVAED QDALEAITIM VTRNFGSLPV VNASRRPVGM
VTERDFLLMF QDLDPMFSVS GFVTPRVNTV FRDTLLEQAV RMMLRRGFRR LPVTDEDGKV
VGMVTAADAV KAAAKAVEKL EPELFFGRRI RDIMKTPVVT VEEDRSVNEA AALMITKGIG
ALVLLDKEGR AKGIVTERDL LIALHYQLHL PFVKGKSHA
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