Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0497 |
Symbol | |
ID | 5103658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 452297 |
End bp | 453229 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640506402 |
Product | agmatinase |
Protein accession | YP_001190597 |
Protein GI | 146303281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCAGA TAGATGCCCT CAAATCCCCG AGATTTTCTC AGATTTCGAC CTTTGCTCGA TTACCCCTCT GCGGAGACGA GAGGGTCGAG GCAGTTTTCA TAGGAATTCC CTTCGATGAC GCCACAACCT ACAGGCCAGG GGCAAGGTTC GGTCCCATGG GTATAAGGGA TGGTTCTAGG TTGTTGAGGC CCTACAACCC CTTCCAGAAG GTATATCCGC TTGACGAGCT CTCCGCCTGT GATGGGGGAG ACGTGGATGT GATTCCGGGT CACATTGAGG ATACCATGAA GAGGATTGAG GAGGTCCTCG TGGGAAGGAT GAGGAACTCG ACCCTCTTCA TAGCGGGAGG GGATCACTCC ATCACCCTAC CAGTGCTGAG AGCAGTGCAC AGGGTTCATG GGAAGGTAAA CCTGGTTCAC CTGGACTCGC ATTACGACTT CTGGGACTCC CACTGGGGTA AGAAATACGA CCACGGAACC TGGCTCAGGA GGGCCCTCGA GGAGGGTCTT CTGAACGAGG TAATACAGCT TGGGATAAGG GGCTCCCTCT TCTCCCACGA GGATGTAGAG GACTCCAAAA GACTTGGCAT AACCTCCTAC AACATTAGGG AGGTGAAGGC TAACCCGGAG AAGGTGATCA GGGAAATTAA TGGTCTTGAG GGGCCCACTT ACATCTCCTT TGACATAGAC GTGGTGGATC CAGCTTTCGC CCCTGGGACC GGGACACCTG AAGTGGGCGG GCTAACTTCG TTTGAGGCAC TGGAGATCCT AAGATCCCTA AACCTGAACC TGGTGGGGTT TGACGTAGTT GAGGTTTCCC CGCCCTACGA CGTGAGCGAA ATAACCTCCA TGTTGGGGGC AAACCTGATA TATGAGGCCA TGAGCTTGAA GGCGAGGATG AAGCATGGAG AGGGAGGTAA AGCGGGAAAT TAG
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Protein sequence | MRQIDALKSP RFSQISTFAR LPLCGDERVE AVFIGIPFDD ATTYRPGARF GPMGIRDGSR LLRPYNPFQK VYPLDELSAC DGGDVDVIPG HIEDTMKRIE EVLVGRMRNS TLFIAGGDHS ITLPVLRAVH RVHGKVNLVH LDSHYDFWDS HWGKKYDHGT WLRRALEEGL LNEVIQLGIR GSLFSHEDVE DSKRLGITSY NIREVKANPE KVIREINGLE GPTYISFDID VVDPAFAPGT GTPEVGGLTS FEALEILRSL NLNLVGFDVV EVSPPYDVSE ITSMLGANLI YEAMSLKARM KHGEGGKAGN
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