Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0397 |
Symbol | |
ID | 5103640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 346610 |
End bp | 347143 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640506303 |
Product | hypothetical protein |
Protein accession | YP_001190498 |
Protein GI | 146303182 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCAG ATGTAAGGGA TGCAAAGCAG AAGGAAATAG CTGAGGTCCT AAAGCAACTG GACATGCTAA CCAAGATGAC GGGACTACCC ATTTATCCTG AGCCGAAAAC AGGAAATCCC CTATGGTCAG ATGTAAGGGA ACTTGACCTA AGGTATCAGA TTCCGGTAAA GAAAATATCG AAATTCTTTG ATGAGCTTAA GAAGGGGAAG GTCCTAGCCA CAAGGTGTTC AAAATGCGGT ACAGTATATT TCCCGCCTCA GGATGACTGC CCCAAGTGTA AAACTTCAAA CCTAGAGTGG AAGGAGATCC AGGGAGAAGG TGAAATCTTA ACGTTCACTG TGATTTCAGT GAAGCCTCCT TCATTTGCCC ACTACCCTGA TTACGTTGTT GGGATAGCCA GGTTTGGGGA CGTAAATGTG ACCGCATGGG TGGACGGTCC TAGGGAGAAG ATAAAGGTTG GCTCGAGGGT TAAGCTTGAC GTCTCTAAAA GGGAGCCTGA GGGATATATT ACATATAGAC TAATCTTAGT TTAA
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Protein sequence | MISDVRDAKQ KEIAEVLKQL DMLTKMTGLP IYPEPKTGNP LWSDVRELDL RYQIPVKKIS KFFDELKKGK VLATRCSKCG TVYFPPQDDC PKCKTSNLEW KEIQGEGEIL TFTVISVKPP SFAHYPDYVV GIARFGDVNV TAWVDGPREK IKVGSRVKLD VSKREPEGYI TYRLILV
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