Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0251 |
Symbol | |
ID | 5103871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 211668 |
End bp | 212435 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640506157 |
Product | ABC-2 type transporter |
Protein accession | YP_001190352 |
Protein GI | 146303036 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.452318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGACA GACTTTATGC GCTCTATATG AGGGAGGCAA AGAGGATATT CCGAAGCGTG TATATGTGGA TAATGCTAAT CTCACAGCCC ATAATGTGGC TAGTGTTCTT CGGTAGCAGT TTCTCTGGTG TACCTTCTCA AGTCCTAATA AGCTTCTTTC ACACTACCAA CTACATAGCC TTCATTCTAC CCGGTGAGTT ATCCATATCC ATGCTTTTCG TGGGGATGTT CAGCTCCATG AGCCTTATCC AAGACAAGAG GTTCGGTTAC TTGAAGAGAG TCCTCATTAC CCCGACACCG AAATACGACG TCTTTCTAGC TAAGACGCTA GGTGGAATGA CAAGGGGATT ATTGCAGGTT CCAATTCTAC TGGTAGCCAG TTACTTCCTA GGAGTAAGGT TAAATCTTAC TCCACTTTCG CTCGGAGTCC TGTTCCTATC TCTAGCTTTC GTTGGATTGG GTTTCTCCTC ACTCTATTCC ATGTTCACCC TAAAGACTGC TGACTGGCAA GCACCCGGAG TTATATCAAA CCTGATAAAT CTACCTCTCA TGTTCTCTAG TACAGCTCTC TTTCCAAAGG CCTTCTTCCC TGGATGGTTA AGGGCAATAA GCGACGTTAA CCCTCTCACT TATGCTGCTG AACTTAACAG AGGAATGTTG CTTTATAATG ACCCATCGTG GAATTACCTG GGATACCTTG CCGTGTTTGC TCTTGTAATG GTTCTCTTGG GAAGCATATT AACAAATAAG TATCTAAATG CAGAATAA
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Protein sequence | MIDRLYALYM REAKRIFRSV YMWIMLISQP IMWLVFFGSS FSGVPSQVLI SFFHTTNYIA FILPGELSIS MLFVGMFSSM SLIQDKRFGY LKRVLITPTP KYDVFLAKTL GGMTRGLLQV PILLVASYFL GVRLNLTPLS LGVLFLSLAF VGLGFSSLYS MFTLKTADWQ APGVISNLIN LPLMFSSTAL FPKAFFPGWL RAISDVNPLT YAAELNRGML LYNDPSWNYL GYLAVFALVM VLLGSILTNK YLNAE
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