| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0232 |
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| Symbol | |
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| ID | 5104098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 192050 |
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| End bp | 193858 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506137 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190333 |
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| Protein GI | 146303017 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2433] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0116565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTAA TGGGTATCGA CATAGAGAGG GGGTCGCCCA ATTCCACGGA ACAGCCTAGA
TACTCAGTGG TAATTCTAGA CGAAAACGGA GAAACAGTGG TTAAGGTCGA AGATGTAACT
AGGAGTAGGT TAGTAAGACT GGCCTGGGAG TACGACGTCT CACTTCTTGG AACTGACAAC
ATTTACGAGC TAGGTAGCAA CGACAAGGAA GTAATATCGC TTCTATCCCT GTTACCCGAG
AAACTGGAGG TAGTTCAGGT TACAGTAAAG AACGGCGTCT TCCTCGACCT AAAGGATGTA
GCTAAGGAGT ACGGTATTGA GATTCAGGGG AAGCCGACTC CGTCCAGGAC TGCCTTTATC
GTGGCGACCC TAGCTCTCAA GGGGGCAGGG ACCAAGATAA AGTTCGTTGA AAACAGGACC
AAAATCATCA TTTCCAAGGG GAGAAGATCA GGACCAGGGG GAATGAGCTC CAATAGATAC
AAGAGGCATC TGAGGGGATT GGTGCTCAGG GTTTTTAGAA GAGTGAAGGA AGAACTGGAC
AGACACAACT TTGACTATGA CGTGGTTGTC AGGAGAACTA AGGCTGGAAT GGAAGGGGCT
ATGTTCATTG TTTATGCCCC AAGGGAGAGC CTATACGGTC TAGTCAAGAA AATGAGTGGA
CACGACGTTA ATCTCGAGAT CAGGGCCTAC TATAGGGATA GAATTGAGTT TGTGGACACT
AAGAGGGTTT CCCAGAGACC TGTTATAGTA GGGTTAGATC CAGGTCTGGA AGTTGGAATC
TCGATCCTCG ACATGTACGG AAATCCTGTA CTCCTCACTA CCAAGAGGGG AATTGACAGG
GAGTCTGTGA TAGAGCTCGT TCTAGAGAAG GGGACCCCAG CCCTCATTGC CACAGACGTT
AATCCAGTGC CAGACACGGT AAAGAAGATG AGCGCAATTC TGAAGGCTAG ACTCTACGTT
CCTGAGAGGT CGCTTTCGGT GGACGAAAAA CAAGCTCTCC TTGACGAATA TTCCACGAAG
TTTGGAATTC ACGTAAGCGA CCCGCACATA AGGGATTCCC TAGCTGCTGC CATTGTTGCG
TATAGGGACG TAGAGAGGAA ACTCAGGCAG GCTGAGGGCA TGATAGGTAG GTTTGGAATA
GACATAGACA GAAACAACGT GTTCAGGTGC GTTGTAAACG GGGGAACCAT TGCCGAATGC
ATTGAGAACG AGATAGAGAA GAAGATATCT GTTCCGCAAA ACGCCGGTAT AGTAAAACAG
GAAGTAAAGA CTGAACACAA CGAGAAGTTG GCTGAGGAGA ACACATTGCT CAAGCAGGAG
TTAATCAGAC TCAACAGGAC AGTGTCTAGG TTAATTCATG AAAAGGAGAT GCTTGAGAGG
AGGGTCGAGG AAATAAAGAG GCTTTACAAT GCTGAACTGG ACAGGGATAG GCGAGTGGAG
GAACTGAAAA GGATACTGGA GCAGAAGAAC AAGGAGATAA TCAAATTGAA GGAACTATCT
CAGGCAGAAT CGGAATCACT GGCTAAGCTT TCCTCAATTA TCGAGAAACT GGTGAAGAAT
GAGGTCACAG TGGTGAGGGG ATACCTGAAG GGGTTGGAGG TTAGGGATGG CCAACTGTAT
TTTGGAGAAT GGAGAATAAG CAACGATCTG GCAGAGTACG TGGGGAGAGA TTTCGCCCTA
ATTGACGAGC GCCTCATTAA GGATCTAAAC CTTCTTAAGA AGGAGAAGGA AATAAGCCGT
GAAATGAGTG AAGACCTGCT AAAAAGATTG GTCGAAGAAT ACAGATCTTC AAGGTCTAGA
ATAGCATAA
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| Protein sequence | MRVMGIDIER GSPNSTEQPR YSVVILDENG ETVVKVEDVT RSRLVRLAWE YDVSLLGTDN
IYELGSNDKE VISLLSLLPE KLEVVQVTVK NGVFLDLKDV AKEYGIEIQG KPTPSRTAFI
VATLALKGAG TKIKFVENRT KIIISKGRRS GPGGMSSNRY KRHLRGLVLR VFRRVKEELD
RHNFDYDVVV RRTKAGMEGA MFIVYAPRES LYGLVKKMSG HDVNLEIRAY YRDRIEFVDT
KRVSQRPVIV GLDPGLEVGI SILDMYGNPV LLTTKRGIDR ESVIELVLEK GTPALIATDV
NPVPDTVKKM SAILKARLYV PERSLSVDEK QALLDEYSTK FGIHVSDPHI RDSLAAAIVA
YRDVERKLRQ AEGMIGRFGI DIDRNNVFRC VVNGGTIAEC IENEIEKKIS VPQNAGIVKQ
EVKTEHNEKL AEENTLLKQE LIRLNRTVSR LIHEKEMLER RVEEIKRLYN AELDRDRRVE
ELKRILEQKN KEIIKLKELS QAESESLAKL SSIIEKLVKN EVTVVRGYLK GLEVRDGQLY
FGEWRISNDL AEYVGRDFAL IDERLIKDLN LLKKEKEISR EMSEDLLKRL VEEYRSSRSR
IA
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