Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0229 |
Symbol | |
ID | 5104095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 190140 |
End bp | 190472 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506134 |
Product | regulatory protein, ArsR |
Protein accession | YP_001190330 |
Protein GI | 146303014 |
COG category | [K] Transcription |
COG ID | [COG4189] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00808889 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAAAG TGAAAAATAT ATTCTCCATG GAACTGGTGG TCTCTGACGT TGAGGACGTA GTTAGAGTCA CTGAGGCTCT CTCATCCGTT ACCAGGGTCA ACATTCTCAG ACTGATAGCC GAGGGGGAAA AGAGCATCAC GGACCTGAGC GAAGAACTGC ATATGACTAA GGGAAACGTT AGCTCTCAAG TTGCGTTACT GGAGAGCTCA GGGTTAGTGG AGGTGAGATA CACCGAGGGA AACAAGGGGT TGAAAAAATT GATCAAAGCC AAGTACTCCA GGATAATTAT CTCCCTAGTT CCCGACGACG GCCCTGAGGA AACCAAGGAA TAG
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Protein sequence | MNKVKNIFSM ELVVSDVEDV VRVTEALSSV TRVNILRLIA EGEKSITDLS EELHMTKGNV SSQVALLESS GLVEVRYTEG NKGLKKLIKA KYSRIIISLV PDDGPEETKE
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