| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0166 |
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| Symbol | |
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| ID | 5104955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 134900 |
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| End bp | 135325 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640506069 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001190267 |
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| Protein GI | 146302951 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000165238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.103345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA AAATAGATGC TAAAGACATA AAAATACTGG AAGTTCTGAA GAAGAACGCA
CGCACTCCAT ACACTATGAT CGCTAAGGAC CTGAAGGTGA GCGAAGCTGC AATCAGGAAA
AGGATCGAGA AATTGACAAA ATTGGGTGTC ATAAAGAGGT TTACCATAGA TTACGAGCTA
GAGAACGAAG TAAAGGCAAT AGTTATGGTA AAGTCGACTC CGCAAATACC TACGCCTGAG
ATTTCTAAAA AAATAGCAAA GACACCGGGC GTAGAAACCG TATACGAGAC CACAGGAGAT
TATGATATAA TTGTTATTGT ACGGGGAATA AACATCTCAT CTATCAACAG GACAATAGAT
GAAATAAGGA GTATACAGGG TGTTATGGGG ACCAATAGTA CTATAATCCT TAGGACTTGG
TTCTAA
|
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| Protein sequence | MSEKIDAKDI KILEVLKKNA RTPYTMIAKD LKVSEAAIRK RIEKLTKLGV IKRFTIDYEL
ENEVKAIVMV KSTPQIPTPE ISKKIAKTPG VETVYETTGD YDIIVIVRGI NISSINRTID
EIRSIQGVMG TNSTIILRTW F
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