| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0009 |
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| Symbol | radA |
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| ID | 5105025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 6305 |
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| End bp | 7279 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640505902 |
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| Product | DNA repair and recombination protein RadA |
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| Protein accession | YP_001190110 |
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| Protein GI | 146302794 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR02236] DNA repair and recombination protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.416037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACC AAGTAGAGGA GAAGAAAAGG ATCAAGACAG TCAAGGATCT ATCGGGCGTA
GGCCAGGCAG TACTTAATAA GCTCACGGAG GCCGGTTACT CAACCCTAGA ATCCATAGCG
GTGGCATCTC CACAGGATTT GAGTACCGCT GCTGGAATAC CCATAACCAC AGCTCAACGC
ATTATCAAGG AAGCTAGGGA TGCCCTTGAT ATTAGGTTCA AGACTGCCCT AGAGATAGAA
CAGGAGAGAG CGAGTGTTAA GAAAATAACT ACCGGAAGCC AGGCCCTAGA TGGCCTTCTA
GGAGGAGGTA TAGAAACAAG GACCATGACA GAGCTATTTG GCGAATTCGG TTCGGGCAAG
ACTCAGATAT GCCATCAGGT TTCCGTTAAC GTTCAGCTTC CCCCAGAAAG GGGTGGACTT
TCCGGCAAGG CGTTATACAT AGATACTGAG GGTACCTTTA GGACTGAGAG AATAAAGGCG
ATGGCATCTG CGCTAGGCCT TGAGCCCAAG GAGGTTCTTC AGAACATCAT GAGTATAAGG
GCCATAAACA CCGATCACCA AATTGCCATA GTTGAGGAAC TGCAGGATAT AATAGCAAAA
GACAACTCCA TTAAACTAGT GGTAGTTGAC TCTATAACGT CTCATTTCAG GGCAGAGTAT
TCAGGGAGAG AGAACCTGGC GGTTAGGCAA CAGAAGTTGA ACAGGCACCT GCACCAGCTT
GTGAGACTGG CCGAGATATA TGACTTGGCA GTAATAGTTA CTAACCAAGT TATGGCTAGG
CCAGATATGT TCTACGGAGA TCCAACGGTT GCTGTGGGTG GCCATACCCT ATATCACGTT
CCAGGGATAA GGGTTCAGAT AAAGAAGAGT AGGGGCAATA GAAGGATTGC TAGGATGGTT
GACGCACCTC ATCTCCCAGA GGGAGAGGTA GTCTTTAGCA TAACCAACAC GGGTATAAGG
GACGCAGAGG AATAA
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| Protein sequence | MADQVEEKKR IKTVKDLSGV GQAVLNKLTE AGYSTLESIA VASPQDLSTA AGIPITTAQR
IIKEARDALD IRFKTALEIE QERASVKKIT TGSQALDGLL GGGIETRTMT ELFGEFGSGK
TQICHQVSVN VQLPPERGGL SGKALYIDTE GTFRTERIKA MASALGLEPK EVLQNIMSIR
AINTDHQIAI VEELQDIIAK DNSIKLVVVD SITSHFRAEY SGRENLAVRQ QKLNRHLHQL
VRLAEIYDLA VIVTNQVMAR PDMFYGDPTV AVGGHTLYHV PGIRVQIKKS RGNRRIARMV
DAPHLPEGEV VFSITNTGIR DAEE
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