| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2907 |
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| Symbol | |
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| ID | 8881023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | - |
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| Start bp | 2942499 |
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| End bp | 2944646 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | alpha amylase catalytic subunit |
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| Protein accession | YP_003508674 |
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| Protein GI | 291297276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.245602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGAC GTAAGTGGGC TTTACTGTGG CTGCTGCTTC TGGGCTTCTC CTGGGCCCAG
CAGAGAGTTC CCGTCACCTT CACCTACGAC CCCCCCTACG GCCTCGAGGT GCGCTCGGTG
AGCCTGCGCG GTAGCTTCAA CAACTGGGCC GAGCTGCCCA TGCAGAAAAC CGAGGACGGG
GTCTGGCAGG TCACGGTGGA GCTGCCGCCG GGTCCCATCC AGTACAAGTT CTTCATCAAC
GGGCAGTGGC CCAAAAACAT GTGCGAGGAC GAGACCTTCG GTACCCCGCA GGTGGACGCC
GAGGCTGAAG GCTGCACCGA CGACGGCCAG GGCGGGAAAA ACGCGCTGCG GGAGGTGGGG
CGGGTGGCCG ATGCGCCCAC CGATAGCGGC GGGCTGGCCT TCGAGCACGA CCCCAGCCAG
CCGCGCTTCG TCTCGCAGGC GGCGGGCCGC CTGTCGGTGC GCTTCCAGGT GCCGGCGGGT
AGCATCCGCT CGGCGGTGCT GCGGGCCGAC CGCGACCACC CCTTTACCCT GCAGCTGAGC
GCGCCCGAGG GAGAAACCTG GCGGGTGGCC CTGCTGTCCA CGCTCCGGCA GTACCGCATT
GAGGTGGTGG ACAAAGACGG CCAGGAACAC ACCTTTGGCC CCTTCGAGGT GCCGGCCCGG
GTTTTCCGGG CGGTGGACTG GGTGGCGGGG CGGGTGGGGT ATCAGATCTT CCCCGAGCGC
TTCTGGAACG GCGACCCCCG CAACGACCGC CGGGCCCTGG AGGCCACCCA GGCCCGTTTC
GACCAGACCT GGAGCGGCCG GCCCCCCTAC CTCTCGCGCT GGAGCGACCC GCCCGGCGAC
TACCACTGCT GCCAGCAGTA CTACGGCGGC GACCTGGCCG GGGTGCTGGA GCGCCTGCCG
CACCTGCGCG CGCTGGGGGT GAACCTGATC TACTTCAACC CCCTTTTCGA TTCGGGCTCG
GCCCACGGCT ACGACACCCA CGACTACGTG CGGGTCTCGC CCAAGTTTGG CGACAACGCC
CTGCTCAAGC GCCTGCTGGC CGAGGCCCGG CGCCAGGGCA TCCGGGTTAT CTTCGACTTT
GTACCCAACC ACACCGGCCT GGGGCACTGG GCCTTTCAGG ATGTGGTGAG GAAAGGGCCC
GAATCGCGCT ACTGGGACTG GTACTTCATC CGCCGGTGGC CCTTCACCCC CGGCGATGGC
CGCGCCTATG TGGGCTGGGC CGACCTGGGC AGCCTGCCCA AGCTCAACAC CGCCAACCCC
GAGGTGCAGG ACTACCTGAT CCGGGTCTCC AGGTTCTGGC TCAACTTCGG CTTCGACGGG
ATTCGGGTGG ATGTGGCCAA CGAGATCTCC ACCGAGTTTG TGCAGAGATG GCGGGCCGAA
CTCAAGGCCC TGAAGCCCGA GGTGTACCTG GTGGGCGAGG TCTGGGATCT GCGCCCGCAG
TATCTGCAGG GCGACCAGTT CGACTCGCTG ATGAACTACA CCCTGGGGCG CGGGGGCTCG
CCCCCGGCCA TGGGGGGTAT TCTGGGGTTT GCGAAGGGAG GCCCTTTGCA GAGCGGGGCG
CGCGTGCTGG GCGAGCTGGC CCGGGTCTAC GCCGCCTACC CCGAGGCGGT GGCCGCCATG
GGCTTCAACC TGATCGGTTC CCACGACACC CCCCGCGTCC TGACCGACCT GGGCGGGGGT
GGTTTGCGCG ACACCCCCGG CCCGGAAGCC CTGGCCCGGC TGCGGCTGGC CTCGGCCATG
CTCTATGCCC TGCCGGGGGC CTCGGTGATC TTCCAGGGTG AGGAGTGCGG TTTTACCGGC
GAGCGCGGGG TGTGGCCCGT CAACGAGCTG TACCGCTACC CGTTGCAGTG GGAGAGGTGC
CGCGCCGATG TACTCGAGCA CTACCGCTTG CTGGGCCGCC TCAAGGGCCA GCTCAAAGCC
TTCCAGAGCC CGCTTTTCCG CACCTACCTG GGTGAGGGCA CGCGCCTGGC CTTTTTGCGG
GGGGAGCCGG GGGTGGGCGA GGTGCTGGCG GCCTTCAACA ACGGCCTCGA GGCCGCTTCG
CTGCCCCTGC CCCCCGGCCA GTGGCGCGAT GCGGTGGAGG GGCGGGTCTA CCAGGGGCAG
GTGCTTTTAG CCGGGCTGGG GTGGCGCTAC CTCGAGCGGG TTCGCTAG
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| Protein sequence | MQGRKWALLW LLLLGFSWAQ QRVPVTFTYD PPYGLEVRSV SLRGSFNNWA ELPMQKTEDG
VWQVTVELPP GPIQYKFFIN GQWPKNMCED ETFGTPQVDA EAEGCTDDGQ GGKNALREVG
RVADAPTDSG GLAFEHDPSQ PRFVSQAAGR LSVRFQVPAG SIRSAVLRAD RDHPFTLQLS
APEGETWRVA LLSTLRQYRI EVVDKDGQEH TFGPFEVPAR VFRAVDWVAG RVGYQIFPER
FWNGDPRNDR RALEATQARF DQTWSGRPPY LSRWSDPPGD YHCCQQYYGG DLAGVLERLP
HLRALGVNLI YFNPLFDSGS AHGYDTHDYV RVSPKFGDNA LLKRLLAEAR RQGIRVIFDF
VPNHTGLGHW AFQDVVRKGP ESRYWDWYFI RRWPFTPGDG RAYVGWADLG SLPKLNTANP
EVQDYLIRVS RFWLNFGFDG IRVDVANEIS TEFVQRWRAE LKALKPEVYL VGEVWDLRPQ
YLQGDQFDSL MNYTLGRGGS PPAMGGILGF AKGGPLQSGA RVLGELARVY AAYPEAVAAM
GFNLIGSHDT PRVLTDLGGG GLRDTPGPEA LARLRLASAM LYALPGASVI FQGEECGFTG
ERGVWPVNEL YRYPLQWERC RADVLEHYRL LGRLKGQLKA FQSPLFRTYL GEGTRLAFLR
GEPGVGEVLA AFNNGLEAAS LPLPPGQWRD AVEGRVYQGQ VLLAGLGWRY LERVR
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