Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2820 |
Symbol | |
ID | 8880936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2864862 |
End bp | 2866532 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_003508587 |
Protein GI | 291297189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00179058 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0521879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTT CCGCATTTAC GTTGAGACCC GAGGTTGCCC AGGCCATCCA GGCCAAAGGT TTTACCACCG CCACCCCCAT CCAGGCCGCG GCCATTCCGC TGGCCCTCGA GGGCAAAGAT GTGCTGGGCC AGGCCCGCAC CGGCACCGGC AAGACCCTGG CCTTTGGCAT CCCCATCGCC AACCGGCTGG ACGCGGCCCG CGAGCGCGGG CGCGCTCCCA GGGCCCTTAT CCTCACCCCC ACCCGCGAAC TAGCCCTTCA GGTAGCCAAA GAGCTGGAGT GGCTGGCCCC CCACCTGACC ATCACCCCCA TCTACGGGGG CACCGGCTAC GGCAAGCAGG CCGAAGCCCT CAAGCGCGGC ACCGACGTGG TGGTAGCCAC CCCAGGCCGG GCCATTGATT ACCTCGAGCA GCGCGTCCTT GACCTTTCCA GAATTGAGAT TGCGGTGCTG GACGAGGCCG ACGAGATGCT CTCGATGGGC TTTGAGGAAG CCGTCGAACA GCTCCTGGAA GCCACCCCAC CCACCCGCCA GACCCTGCTG TTCTCGGCCA CCCTACCCAC CTGGGCGCGC CGCCTCTCCG AGCGCTACCA AAAGGCGGCC ATCCACATCA ACGTGATCAA GGACGAGGCC ATCTCCTACG AAGAAGTGGC CATTCAAGCG CCCATTCACA ACCGCCTCTC GGTGCTTTCG GATCTGCTTT TCGCCTATGC ACCCGAGCGC ACCATCGTTT TTACCAGCAC CAAGGCCGAG TGCAATGACC TGGCCCTGGG CTTAGAAAGC CGGGCCCACA GCGCGGCCCC CATCCACGGC GATATGGGCC AGATTGACCG TGAACGGGTG ATGGAACGCT TCCGCAGCGG GGCGGTGAGC GTGCTGGTGG CAACCGATGT GGCCGCTCGA GGCCTCGACA TCCCCGAGGT GGACCTGGTG GTGCACTACC GCCTGCCCGA CCAAAACGAG TCATACCTGC ACCGCTCGGG CCGCACCGGG CGGGCGGGGC GCTCGGGCAA GGTGGTGATT CTGTACGGCC CGCGTGAGAA GCGCGAACTG GAGACCCTCG AGCGCGAACT AAAGCGTAAC TTCAAGCGGG TTAATCCCCC CACCCCCGAG GAGGTCATGG CCGCCAAGTG GGCCATGCTG GCCCGCCGCA TCGCCAAGCA GCCCGAGGCC GATAAAAAGC TCTGGCGCGA ACAGGCCGAA CGCCTGATAG CCGAGGGCGG CGTCGACGCA GTGGCCGGTA TGCTGGCCCT GATTCTGGGC GGCGCCCCCA CCCCCAAGAG CCTGATGACC GGTGAGGAGA ACTGGGTCAC GGTCAAGCTC GCGGGCTCGC GCATCAGCGT GAACCGGGCG GTGGCGGTGT TGAAGAGCGC CGGCGCTGGG GAGATTGGCC GGATTCGCCT GGATGGGGAT GTGGCCGCCT ACGTGGACAT CCGCCCCGAG GATCTGAGCA GGCTGGATCA CACCGCGCTG CGCGATCTGC GCCTCACCAA GGCCAGCGAG GTTCCCGCTG AAACCCGGCA GTCCGAGCGC CAGGGGCAGG GCTTCGCGCG CGGTCAGGGC AAGCGCCAGG GTCAGGGTCG CCGCGAAGGA AGCAGCCAGC GCGAGCGGCC CTTCGAAAGC CCGTCCGAAA ACCGCCGCGA AGGGGAACGC CGGCGGGTCG TGTACCGATA A
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Protein sequence | MEFSAFTLRP EVAQAIQAKG FTTATPIQAA AIPLALEGKD VLGQARTGTG KTLAFGIPIA NRLDAARERG RAPRALILTP TRELALQVAK ELEWLAPHLT ITPIYGGTGY GKQAEALKRG TDVVVATPGR AIDYLEQRVL DLSRIEIAVL DEADEMLSMG FEEAVEQLLE ATPPTRQTLL FSATLPTWAR RLSERYQKAA IHINVIKDEA ISYEEVAIQA PIHNRLSVLS DLLFAYAPER TIVFTSTKAE CNDLALGLES RAHSAAPIHG DMGQIDRERV MERFRSGAVS VLVATDVAAR GLDIPEVDLV VHYRLPDQNE SYLHRSGRTG RAGRSGKVVI LYGPREKREL ETLERELKRN FKRVNPPTPE EVMAAKWAML ARRIAKQPEA DKKLWREQAE RLIAEGGVDA VAGMLALILG GAPTPKSLMT GEENWVTVKL AGSRISVNRA VAVLKSAGAG EIGRIRLDGD VAAYVDIRPE DLSRLDHTAL RDLRLTKASE VPAETRQSER QGQGFARGQG KRQGQGRREG SSQRERPFES PSENRREGER RRVVYR
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