| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1402 |
|---|
| Symbol | |
|---|
| ID | 8879499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1438307 |
|---|
| End bp | 1439032 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003507184 |
|---|
| Protein GI | 291295786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.154165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCCA AGGTGTTGTT GGTTGAAGAT GAACCCGCTT TGGCCGGGGC CCTGGCCGAT
AACCTCGAGG GCGAGGGTTA TGCGGTGGAA GTCGCCCCGG ATGGTCGCGC GGCTCTCGAG
CGCTGGGCGG CCTGGAACCC CGACCTGGTG GTACTGGACG TGATGCTGCC GGGCCTGAAC
GGCCTGCAGG TCTGCCGGCA GATGCGCGCC CAGGGCCAGA CCACCCCGGT GCTGTTCCTA
TCGGCCAAAG GGGCCCCCGA GGAGCGGGTC GAAGGGCTCA GGGTGGGGGG CGACGATTAC
CTGGCCAAAC CCTTCCACCT GCCCGAGTTT TTGCTGCGCG TCAAGAACCT TCTGCGCCGC
CGGGCCGAGA CCCCAAGGGC GGTGTACGAG TTTGCGGGGC ATCGGATCGA CTTCCGCGCC
TGGACGGCTT ACCTGAAGGA TGGCCGCAAA GAGGTGCTGG GCGAGCGTGA GATGGCGATT
CTGCGCCTGC TGATTGAGCG GGCCGGCCAG GTGGTGAGCC GCGACGAGAT TCTCGACCGG
GTCTGGGGCC AGGAGGTGTT TCCCAGCAGC CGCACCATCG ACAACTTTGT GGTGCGGTTG
CGCCGGCTGT TCGAGCCCGA TCCGGCCCGC CCGGTGCACC TTCACACCGT CTGGGGGGTG
GGCTACCGCT TCACCCCGCA GCCCGAGCTC AAATCCGAGA CTGCCTTTTC TAAGGAGCCA
ACTTGA
|
|---|
| Protein sequence | MKPKVLLVED EPALAGALAD NLEGEGYAVE VAPDGRAALE RWAAWNPDLV VLDVMLPGLN
GLQVCRQMRA QGQTTPVLFL SAKGAPEERV EGLRVGGDDY LAKPFHLPEF LLRVKNLLRR
RAETPRAVYE FAGHRIDFRA WTAYLKDGRK EVLGEREMAI LRLLIERAGQ VVSRDEILDR
VWGQEVFPSS RTIDNFVVRL RRLFEPDPAR PVHLHTVWGV GYRFTPQPEL KSETAFSKEP
T
|
|---|
| |