| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1301 |
|---|
| Symbol | |
|---|
| ID | 8879396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1331006 |
|---|
| End bp | 1333648 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003507083 |
|---|
| Protein GI | 291295685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.203526 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA GTCGCAAACT CACCACCGTT CAAGCGGCGC TAAGGGTGCT GGCCTACCTG
GCCGAACACC CCGAGGGGGT GGAGGCTGCC CGTCTGGCCG CTTTTTTAGG CAAAAGCCTT
TCCACCGCCT ACGCCCTGCT GGCCAGCCTG GTCTCGGAAG GGTTTGCCGA ACGGGACGGT
AGCACCTACC GGCTATCCAA AAACGCCCTG GCGCCCTCAC CCAACCGCCT GGCCGAGCCT
GAGAAGCTAT CGGATGCGCT GGAAGAGCTT TACCTGCGCA CCCGTGAGCG CACCTACCTG
GCCCTGCTGG ATCGCGACGG CAAGCTGCGC CTGTCCACCC GCGGGCGGCA GGGCCTGCCC
AAGCTGGCCG GCCTCGTGGA TCAGGTGTCT GAAGGCTTTC ATGCCCTGGC TTTAGGCAAA
GCCGTGCTGG CCTATATGGA CAGCCAGGCC CAGGCCCCCC ACCTGCAAGA TCTGAAGGCT
TATACCCGGC TCACCATCAC CGACCCCCTG ACCCTGGAGG AAGAGCTGGC CAAGGTGCGC
CAGATGGGGT TTGCCGTGGA GCTCGAGGAG CACGCCGACG GCATCTCCGG GGTGGCCGCC
CCCATTTTCA GCCCGGACGG TACGGTGATA GGAGCCTTTG GGGTGGTGGT GCCCTCGAGG
CGCTTTCCTT ATGCCTTCAC CCGGCTGGTG CAAGCTGTGC AGGAGGTAGC CAGGGCTGCT
TCCAGCCGCG TCCAGGTCGA ACACACCCCA CCCAGCGATA GCAAGCCCTT ACCCTCCAGC
GAGCCCGTTT ACCTGGGCGC ATCCAGCGAA GAAACCCCCG TCTGGGCCCC CAGGCCCCTG
GTGGAAAAAG CCAACCTCAA GGACTACCCT GCCGAGTATC GGCGCAGCCT CGAGCAGCCC
GAGGCTTTTT GGGGTGAATG GGCTGAGCGC TTCCACTGGT TCAACCCCTG GAAGCGGGTT
CGCGAAGTGG ACGGCCCCTA CCATCGCTGG TTTGTGGGGG CCACCACCAA CATCACCTAC
AACGCCCTGG ATCGGCACGC CGACGGGCCA CGCCGCAATC AACTGGCCCT GATGGCCCTG
GCCGGGGACG GCACAGTGCA CAAGCTAACC TACCGCGAGC TGCGCGACCT GGCCGCCCGG
CTGGCCGGTG GGCTGCTGTC GCTGGGCATC AAGCCCGGCG ACCGGGTGGC GGTGTATATG
CCCACCGGGC TGGAGATGGC CCTGACCTTT CTGGCCTGCG CCCGCATCGG GGCGGTGCAC
GTGGCCATTC CTGCCGGCCT GGGCAGCCAG GCCCTGCGCG AACGCCTGGA GGATACCCAG
GCCCGGCTGC TGGTGGCGGC CGACCGCATG TACCAGGGCG GGCGCACCCT GCACTTCAGC
CATGTGCTCG AGGAGGCCAT CCAGGGCCTG GATATACCGG TGCTGTGGTT CAGCCGGGGC
GGCGCGGTCA GGCCGCTGGA ATTCTGGGAT TTAATCGAGG CCCACCGGCC CACCACCCCC
GCCCTGCCGG TCGACAGCGA ACACCCCTTG TTCATCCTGT ACACCTCGGG TTCCACCGGC
AAGCCCAAGG GCGTGGTGCA CGTGCACGGG GGCTATATGG TGGGCATCAC CTACCACCTG
CGCACCCTCT TCGACCTGAA GGACGGCGAG ATCTCCTGGG CCACCGCCGA CCTCTCCTGG
ATTGTGGGGC ACAGCTACGG GCTGTATGCA CCCTTGCTGG AAGGACTCAC CACCGTACTG
CGGGCCGAGC GGCTCGACTA CCCCGATGCC AGCAGCTTCT ATGAGACCCT GGAGGACTGC
GGGGTCAACG TACTGATCAT CAGCCCCACC TGGCTACGCA CCCTGCGCAA GCACGGCGAC
GAATTCGCCC AGAAGGCCCA GCTTTCCGAC CTCCGGCTGG TGGCCAGCGT GGGGGAGTAT
CTGGCCCCCG AGATCTGGCA CTGGGCCGCC AAACACCTGG CCCACGTGGT GGATCACTGG
TGGCAGACCG AGACCGGGGG CCCGTGCCTC TCCACCCCCG TGTGCATGCC GGCCAAACCC
GGCAAGGTCG GCCTGCCCCT GCCAGGGGTG GAGGTGCGCG TGGTGGACTC CTTGGGGCGT
GAGCTACCCC CCGGCCAGAA AGGCCACCTG GTCATCAGCC AGCCCTTCCC CCATTTCATG
CGCACCTTCT GGAACAACGA TGAGCGCTAC CTCGAGCAGT GGAGCCGCAT TCCCGGCTGC
TACAGCACCG GCGATATCGC CGTGCGGGAT AAAGAGGGCT ATATCGCCCT GCTGGGCCGC
TCCGACGACG TCATCAAGGC CGGGGAGATG CGTATCGGTA CGGCTGAGAT CGAGGGGGCC
ATGCTCTCGC ACCCTTCGGT GGCCGAAGTG GCCGCGGTGG GGATTCCCAA CCCCGAGGTC
GGTGAGGTCA TTAAGGTATA CGTGGTGCTC AAAACCCGCG AGGCCAGCCT CGAGGTGCGC
GCCATCCTGG CCGACAAACT GCAAGCCCAC CTGCGCCGCC AACTGGGCAA TATCCACCTG
CCCACCGAGG TCGAAATCCT CGACCAGCTA CCCCGCACCA AAAGCGGCAA AATCCTGCGC
CGCCTGCTCA AAGCCCAGGA GCTCGGCAAC GATCCGGGCG ACCTGTCCAC CCTGGAGCCG
TGA
|
|---|
| Protein sequence | MAQSRKLTTV QAALRVLAYL AEHPEGVEAA RLAAFLGKSL STAYALLASL VSEGFAERDG
STYRLSKNAL APSPNRLAEP EKLSDALEEL YLRTRERTYL ALLDRDGKLR LSTRGRQGLP
KLAGLVDQVS EGFHALALGK AVLAYMDSQA QAPHLQDLKA YTRLTITDPL TLEEELAKVR
QMGFAVELEE HADGISGVAA PIFSPDGTVI GAFGVVVPSR RFPYAFTRLV QAVQEVARAA
SSRVQVEHTP PSDSKPLPSS EPVYLGASSE ETPVWAPRPL VEKANLKDYP AEYRRSLEQP
EAFWGEWAER FHWFNPWKRV REVDGPYHRW FVGATTNITY NALDRHADGP RRNQLALMAL
AGDGTVHKLT YRELRDLAAR LAGGLLSLGI KPGDRVAVYM PTGLEMALTF LACARIGAVH
VAIPAGLGSQ ALRERLEDTQ ARLLVAADRM YQGGRTLHFS HVLEEAIQGL DIPVLWFSRG
GAVRPLEFWD LIEAHRPTTP ALPVDSEHPL FILYTSGSTG KPKGVVHVHG GYMVGITYHL
RTLFDLKDGE ISWATADLSW IVGHSYGLYA PLLEGLTTVL RAERLDYPDA SSFYETLEDC
GVNVLIISPT WLRTLRKHGD EFAQKAQLSD LRLVASVGEY LAPEIWHWAA KHLAHVVDHW
WQTETGGPCL STPVCMPAKP GKVGLPLPGV EVRVVDSLGR ELPPGQKGHL VISQPFPHFM
RTFWNNDERY LEQWSRIPGC YSTGDIAVRD KEGYIALLGR SDDVIKAGEM RIGTAEIEGA
MLSHPSVAEV AAVGIPNPEV GEVIKVYVVL KTREASLEVR AILADKLQAH LRRQLGNIHL
PTEVEILDQL PRTKSGKILR RLLKAQELGN DPGDLSTLEP
|
|---|
| |