| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0308 |
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| Symbol | |
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| ID | 8878379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | - |
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| Start bp | 275674 |
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| End bp | 277584 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | alpha amylase catalytic subunit |
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| Protein accession | YP_003506106 |
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| Protein GI | 291294708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGG CCCTTTTTTT TGCAGGCATG GCCGGCCAGA TGGGCGCACC CGACGCCTAC
CGTACCGCCG ATTTGCAGGC CCGGGTGCGC CGCCACTTCC CCGACCTGAT GGCCGGTTTG
CAGGCGGTCT ACCCCCAGGC CCCCGCCGTG GCCGGGCGGG CGGCCCAGGT GATTGGGCGG
AACCTGGCCG AGCGCCCGGC CGAACTGCTG GCTCTGGACC TCGAGCGCAT CCACACCCCG
GACTGGTTTC AGCAACCCCA TATGCACGGC TACATCGCCT ACGCCGACCG GTTCGCGGGC
ACGCTAAAGG GTGTTGGACA GCACATCGGC TACCTGAAGG AACTGGGCAT CCGCTACCTG
CACCTGATGC CTTTGCTGCT CCCGCGCGAG GGCGAGAACG ACGGCGGCTA CGCGGTGGCC
GACTACCGGC AGGTGCGCCC CGACCTCGGC AGCATGGAGG ACCTCGAGGC CCTCTGCACC
CAGCTCCGCC ACGAAGGCAT CAGCCTTTGC CTGGATCTGG TGCTCAACCA CGTGGCCCGC
GAGCACCCCT GGGCCCAGGC CGCCCGGCGT GGCGACCCCA GGTACCGCGC TTATTTCTAC
ATCTACCCCG ACCGCACCCT CCCCGACGCC TTCGAGCGCA CCCTGCCCGA GGTCTTCCCC
GACTTCGCCC CCGGCAACTT CACCTGGGAC GAGGAGCTGC AGGGCTGGGT CTGGACGACC
TTCAACCGCT GGCAGTGGGA CGTGAACTGG AGCAACCCCG AGGTGTTTCT GGAGTACCTC
GACCTGATTC TGTGGCTCGC CAACAAAGGG GTGGAGGTCT TCCGGCTGGA TGCCATCGCC
TTTACCTGGA AGCGCCTGGG CACCCACTGC CAGAACCAGC CCGAGGTGCA CGCCCTCACC
CAGGCCCTGC GGGCCGCGGT GCGCATCGCC GCGCCGGCGG TGGCCTTCAA GGCCGAGGCC
ATCGTGGCCC CGGAAGACCT GATCGCCTAC CTGGGTAGCG GGAAGCACTA CGGCAAGGTG
AGCGAGCTGG CCTACCACAA CACCCTGATG GTGCAGATCT GGAGCAGCCT GGCCAGCCGC
GACACCCGGC TTTTTACCCA GGCCCTCCGG CGCTTTCCGC AAAAACCCCC CAGCACCGCC
TGGGCCACCT ACCTGCGCTG CCACGACGAC ATCGGCTGGG CCATCTCCGA CACCGACGCC
GCCGCGGTGG GCCTGAGCGG CCCGGCCCAC CGGCGCTTTT TATCGGACTT TTACAGGGGC
GAGTTCCCGG GCTCGTTCGC TCGAGGCCTG CACTTCCAGG AGAACCCCGC CACCGGCGAC
CGGCGCACCT CGGGCAGTGC GGCCAGCCTG GCCGGGCTGG AGGCCGCGCT CGAGTCCGGG
AATCCCCGCC TGATCAACCT GGCCATCGAG CGCATTCTGC TGGCCCACGC GGTCTTTATC
GGCTATGGGG AGGGCATCCC GCTCATCTAC ATGGGCGACG AGCTGGGGAT GCTCAACGAC
TACGACTACG CCCAGGAGCC CGCCCACCAG GACGACAACC GCTGGCTGCA CCGGCCCAGA
ATGGACTGGG CCAAAGCCCA GAAGCGCCAC CAGGAAGGCA CCGTGGAGCA CCGGATTTTC
CACGGCATCA AAGGGCTCTT GCAGGCTCGA GCCCGCATCC CCCAGATGCA TGCGGCCTTC
CCTACGCAGG CCCTCTGGCA ACCCAACCCC CACCTGCTTC TGCTCAGGCG TGAACACCCC
CAGGGCCGGC TGGTGCAGGT CTACAACTTC AGCGAGCAGG ATCAGCCCTT CCCCTTCGAG
GCCCTTCAGC AAGAAGGCAT CGTGCAGCCC TTCGACCAGA TCACCCAGGC CCCGGCCCCG
GCCTATCTGG GGCCCTATGC CCGGCTATGG CTGACCCAGC GCCCGGTATA A
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| Protein sequence | MDEALFFAGM AGQMGAPDAY RTADLQARVR RHFPDLMAGL QAVYPQAPAV AGRAAQVIGR
NLAERPAELL ALDLERIHTP DWFQQPHMHG YIAYADRFAG TLKGVGQHIG YLKELGIRYL
HLMPLLLPRE GENDGGYAVA DYRQVRPDLG SMEDLEALCT QLRHEGISLC LDLVLNHVAR
EHPWAQAARR GDPRYRAYFY IYPDRTLPDA FERTLPEVFP DFAPGNFTWD EELQGWVWTT
FNRWQWDVNW SNPEVFLEYL DLILWLANKG VEVFRLDAIA FTWKRLGTHC QNQPEVHALT
QALRAAVRIA APAVAFKAEA IVAPEDLIAY LGSGKHYGKV SELAYHNTLM VQIWSSLASR
DTRLFTQALR RFPQKPPSTA WATYLRCHDD IGWAISDTDA AAVGLSGPAH RRFLSDFYRG
EFPGSFARGL HFQENPATGD RRTSGSAASL AGLEAALESG NPRLINLAIE RILLAHAVFI
GYGEGIPLIY MGDELGMLND YDYAQEPAHQ DDNRWLHRPR MDWAKAQKRH QEGTVEHRIF
HGIKGLLQAR ARIPQMHAAF PTQALWQPNP HLLLLRREHP QGRLVQVYNF SEQDQPFPFE
ALQQEGIVQP FDQITQAPAP AYLGPYARLW LTQRPV
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