| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5998 |
|---|
| Symbol | |
|---|
| ID | 6142149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 255173 |
|---|
| End bp | 256633 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641640053 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_001766736 |
|---|
| Protein GI | 170745279 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.926416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCACGCGCCG CCTGCTCGAA GCGCCCCTCG TGCCGACCCT GGCGCGAATG
GCCGTGCCGA ATGTCGTGGT CATGGTCGTC CAGACCTCCA TCGGCCTGAT CGAGACGTAC
TTCGTCGCGG AACTCGGAAC CGATGCCTTG GCCGGCCTGG CCCTCGTCTT CCCGGTGGTG
ATGCTCGTCC AGATGCTGTC CGCCGGCGGC ATGGGCGGCG GCATCCAGTC GGCGGTCTCC
CGCACCCTAG GCGCGGGCCG GCGGGCGGAG GCAGATCTTC TCGCCTGGCA CGCCGCCGCG
ATCGGCCTCG CACTGGGTGT CGTCACCAGC CTCCTCGCCC TGCCCCTGGG GCCGAGGCTC
TACGCCGCGA TGGGCGGCAC CGGGGGCTCG CTCAGGGCCG CGACCGCCTA CGCGGGCGTC
GTGTTCGGCG CGGCGATCCT GATCTGGCTG TTCAACGCGC TGGCGGCGGT GATCCGCGGG
ACCGGCAACA TGGCGCTCCC GGCCGGCGTC ACCTGCGCGG GGGCCGTCGT GCTGATCCCG
CTCTCGCCCG CGCTGATCTT CGGCTGGGGC CCGCTGCCCA GGCTCGGGGT CGTGGGCGGC
GGCGTCGCCT TCGCGGGCTA CTACGCCGCG GGCTCCGCCG TCTTCGCCGC CTACATCTGG
TCCGGCCGCG GCGTCCTGCG ACCGGGCCGG CGTCCCCCGA GGCTGACCTG GGCGCCGTCC
CGCGAGATCC TGCGCATCGG CCTTCTGTCC GGCATCGCCA GCGTGACCTC GAACGTCACG
GTCATCGCGG CGACCGGCTT CGTCGGGACG GCGGGGCCGG CGGCGGTGGC CGGATACGGC
ACCGGTGCGC GGCTGGAGTA CCTGCTGGTC CCGCTCGTGT TCGGGCTCGG CTCGCCCATC
GCGGCCCTCG TCGGGACGGC CCTCGGCGCC GGGATGGAGG TCCGCGCCCG TCGGGCCGCG
CTGACCGGCG CCCTCGTGGC CGGCGGCCTG ACGGAGACCA TCGGCCTGGT GGCGGCCGGG
TCCCCTGAGA CCTGGCTGGG CCTGTTCGGA GGCGACCCGG CCATGATGGC CACCGGCTCA
TCCTATCTCC GCATCGTCGG GCCCTTCTAC GGGTTCTTCG GGGCCGGCCT CGCCCTCTAC
TTCGCCGCCC AGGGCGCCGG CCGCGTCGGC TGGCCGCTCA CCGCCAGCCT TCTCCGGCTG
GGGGTGGCGC TGGGCGGCGC CTGGATCGCG GCCGTGCTCG GGCTGGGCCT GGCCGGGATG
TTCGCCGCCC TCTCGGCCGG CTTCGTCACC ATGGGCCTCG TCAATGCCGC CGCCTTCGCC
ACGGGGCGGA TGATCCGAAC CAGGGCCGCG CCCGGGACCA CCGCGGCACC GGGCGCCGTC
GCGGCGGGCG ACGGTCCCGC CCTCCGGGCC GCGACGCCCG GACCGGAGCC GATGGGCCGC
ACGCGGCGCG CGGCGTCGTG A
|
|---|
| Protein sequence | MDIRTRRLLE APLVPTLARM AVPNVVVMVV QTSIGLIETY FVAELGTDAL AGLALVFPVV
MLVQMLSAGG MGGGIQSAVS RTLGAGRRAE ADLLAWHAAA IGLALGVVTS LLALPLGPRL
YAAMGGTGGS LRAATAYAGV VFGAAILIWL FNALAAVIRG TGNMALPAGV TCAGAVVLIP
LSPALIFGWG PLPRLGVVGG GVAFAGYYAA GSAVFAAYIW SGRGVLRPGR RPPRLTWAPS
REILRIGLLS GIASVTSNVT VIAATGFVGT AGPAAVAGYG TGARLEYLLV PLVFGLGSPI
AALVGTALGA GMEVRARRAA LTGALVAGGL TETIGLVAAG SPETWLGLFG GDPAMMATGS
SYLRIVGPFY GFFGAGLALY FAAQGAGRVG WPLTASLLRL GVALGGAWIA AVLGLGLAGM
FAALSAGFVT MGLVNAAAFA TGRMIRTRAA PGTTAAPGAV AAGDGPALRA ATPGPEPMGR
TRRAAS
|
|---|
| |