Gene Mrad2831_5953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5953 
Symbol 
ID6142123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp202118 
End bp202627 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID641640011 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001766694 
Protein GI170745237 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0123978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG TATCGGTGGA TGCCCTGCAT CGCAGCGAGA ACCTGAACCT TCATCGGTTC 
CTGCTCCGCA AGCTCGGCAA TCCCGCGGAT GCCGCCGATG CCGCGCAGGA GACGTATCTC
CGTCTCGTCA AGGCGCTCAC CACCACCGAC CTGGAGCAGC CGCGCCTGTT CCTGTTCCAC
CTCGCCCGCA ACGTCGCCGC CAATCTCGGC AAGCGCCGCC GGTTCGAGGC CGGCCTGTTC
CGGTCCATCA CCGATCTCGA GCTGTCCAGC GTCGTGGACG GCCGCGCGCA GACCGAGACG
CAGGTGATCG CCCGCGAGCA GCTGCGCCTC GTCGCGGCAG CGATCGACGG GCTGCCGCCG
CGCTGCCGCG AGGCGTTCCT CCTCAGCACC TTCGAGGGCC TCTCGAACGG GGAGGTCGCC
GCCCGTCTCG GCGTCAGCCG CAACATGGTC GAGAAGCACC TCATCAAGGC GCTGCTGCAC
ATCCGCCGCG CGTGCCACGA ATTCTTCTGA
 
Protein sequence
MAAVSVDALH RSENLNLHRF LLRKLGNPAD AADAAQETYL RLVKALTTTD LEQPRLFLFH 
LARNVAANLG KRRRFEAGLF RSITDLELSS VVDGRAQTET QVIAREQLRL VAAAIDGLPP
RCREAFLLST FEGLSNGEVA ARLGVSRNMV EKHLIKALLH IRRACHEFF