Gene Mrad2831_5599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5599 
Symbol 
ID6141673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5927503 
End bp5930043 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content76% 
IMG OID641631300 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001758227 
Protein GI170751967 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0595123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.659361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA CGGCCACTGC AGTCCCGGCC GGGCTGGCGA ATGCCTTCGC GACCTGGGAG 
CGGCTGCCCG CCCTGGCGGC CGCGCTGGCC GCGCGCGACG CCGTGCATCT CGTGATCGAT
CCGACGGACG CGCGGATCCT GTCCGCGTCC GAAGCGGCGG CCGGTCTCGC CGAGTCGCTG
GCCGGCCCCG CCCTCGCCGG TCTGAACCGG CAGATCGCGG CGGCGGTGGC GGGCGACGCC
GCGCCCCGCC TCGCGCGCCT GCGCCTCGAT GCCCGCCGGA TCGCGCCGCC TGTTCTGTGC
TGGCTTGCGC GGGGCGCGCA GGCCGACGGC CGGCCCGCGA TCCTCGTCGT CCCGACCGCG
CCGGTGTCGG CGGGCCGCGC CCGTCCCGCC CGCCCGGTCG AGGCTCCGGT CGAACCGCGC
GCCGCGCCTT CTGGGGCGGA GGGCGCGCCA CCCCTTCAGC CGCAATCGCC CTCAACGGTG
CCGCTGCGGC GCGACGACCG CTTCCTGTGG CGCCTCGATG CCGCGGGTGT CCTGACCACG
CTCACCGGCC CGGAGGCCCT GTCCGGGCTG GTCGGGCAGC GCTGGCAGGA TCTGGCCGCG
AGCGGGCGAC TCTCCGGCGC CGACGCCGTG CTGGCGGCCC TGCGCGACCG GCGCACCTTC
CGCGGCGAAC CGGCGGTACT CGATGCCGGC ACCGGAGCGT TCCGGGTCGA TCTGTCGGGC
GCCCCGCTGG GGCGGGGCGA CGCGGCCTTC TCGGGCTTCG GCGGCTTCGG TCTGATCCGG
AGCGTCCCGG CCGCGCCTCC GGAGCCGACC CCCGAGGCAG TACGGGAGCC GACGCCGATT
GCGACACCGG AGCCCGCAGC CTGTGAGGAT GCGGGGGCCG CGATAGTCCC GGCCGAGCCC
GGCGAGGTCG CTATCCCTGT CGGGGTGGAC GCGGACCCCG TCGCCGCGCC GCTGTCGAAC
GACGAGCACG CCGCGTTCCG CGAGATCGCC CGGGCGCTGG GGGCCCGCTA CGCCGGCGAC
GAGGCCGAAT CCGGTTCGCC CAGGACCGAG AGCGGTTCGG TGATGCCGTT CCCCGCTCCA
CAGGCCGGTC CGGCGGAGAC CCGCGCCGTC TCGGACGATG TCGGGGCGGA CCCGGACACG
GCGGAGATCG CACCGGTCGA CGACGCGGCA CCGGCGCCCG CGACCGATCT CCTCGGCGGA
TTGCCGCTGC CGGTGCTGGT CCATCGAAAC GGCACGATCG TCGCGGCGAA CGGCGCCTTC
CTGGACCTGA CCGGCTATCC TGATCTGCCG AGCCTCGCGC GCGTCGGGTT CTCGGGATTG
CTGCCCGGTC TTCCCGCGGC GGAAGCACCC GAGCCGTCCG CACGCCGCAC GACCGTCACG
ACGGCCGACG GCGGCGCCCG CCCCGTGGAA CTGCTGGGGG GTGCCCTGCC CTGGGCGGGC
GCGACCGCCA CGTGCCTGGT CGCGCGCCCC GTCGAGGAGG CCGACGTCGC GGACGCGCTC
AGGGCCGAGC GCCTCGCCCG CGCCGCCCAG ACCGAGCGGA CGGCCAGCGC CGAGGCGACC
CTCGACGCGC TGGAAACGGG CGTCGTCACG GTCGACGCGG CCGGGCGCAT CGTCGCGCTG
AACCGCGCCG CGACCGACCT GTTCGGCTGC GACCCGCGCG AGATCGTCGG CAGCACTTTT
GTCACGCTGT TCGACGGGGA CAGCGTCCTG ACGGTCGCCG ATGCCCTTCG CGGCGCGGCG
CCCGGGCGGC GCGTCGTGCG CCTCGCCGGG GCGCCCGTGT CGCTGACCGT AGCGGCGGGG
CAGGGCCGAC GGGTGGTCCA GATCGGGCGG GCCGAGAGCG AGGCGGCGGA GCGGGCCGCC
GAGGGCCGCC CGGATCCCGC GCCGGCTCGC GCCGACGCCC TCGGCCGGCT CGAGGGCGCC
GTCCGCCAAC CGCTGACCGG GATCATCGAC CTCGCCGCCG CGATGCTGAA GGAGCCGTTC
GGCCCCCTCG GGGACGCGCG CTACAGGGGC TGCCTCGCCG AGATCAAGGC CTCGGGCGAG
GCGATGCGGG AGCGCGTCGG GAAGCTCCTG GACCTCGCCG CCGTCGAGGC CGGGTCGCTC
CACCTGGAAC CGCGCGCCCT CGATCTCAAC GACGTGGTGG CGAGCTGCGT CGCCCGGCTC
CAGGGCGAGG CGGCCCGGGG CCGCATCGTC ATGCGGACGA GCTTCTCCAC CGATATCGGC
GACCTGGAGG CCGATGAGCG TTCGGTCAGC CGCGCGGCCA GCTTGGTGAT CGAGAACGCG
ATCCGGCGGT CGACCGCCGG CAGCCAGATC ATCGTGTCCA CCGGTTCGAC GGAGCGGGCG
GGTATCGCCG TGCGGGTGCG CGACACCGGT GCCGGCCACG CCCCGCGGTC GGAGGCTCCG
CAGGACGATG TCGAGGACGG GCTGGCGCTG CCGCGGGCGC TGGTGGAGGC CAATGGCGGG
CGGCTGGAGC TCTCCGCCCG GCCGGAAGAC GGCACGCTCG TGGAGATCAT CATGCCCACG
CGCCGGGCGG CCAACGGCTA G
 
Protein sequence
MTPTATAVPA GLANAFATWE RLPALAAALA ARDAVHLVID PTDARILSAS EAAAGLAESL 
AGPALAGLNR QIAAAVAGDA APRLARLRLD ARRIAPPVLC WLARGAQADG RPAILVVPTA
PVSAGRARPA RPVEAPVEPR AAPSGAEGAP PLQPQSPSTV PLRRDDRFLW RLDAAGVLTT
LTGPEALSGL VGQRWQDLAA SGRLSGADAV LAALRDRRTF RGEPAVLDAG TGAFRVDLSG
APLGRGDAAF SGFGGFGLIR SVPAAPPEPT PEAVREPTPI ATPEPAACED AGAAIVPAEP
GEVAIPVGVD ADPVAAPLSN DEHAAFREIA RALGARYAGD EAESGSPRTE SGSVMPFPAP
QAGPAETRAV SDDVGADPDT AEIAPVDDAA PAPATDLLGG LPLPVLVHRN GTIVAANGAF
LDLTGYPDLP SLARVGFSGL LPGLPAAEAP EPSARRTTVT TADGGARPVE LLGGALPWAG
ATATCLVARP VEEADVADAL RAERLARAAQ TERTASAEAT LDALETGVVT VDAAGRIVAL
NRAATDLFGC DPREIVGSTF VTLFDGDSVL TVADALRGAA PGRRVVRLAG APVSLTVAAG
QGRRVVQIGR AESEAAERAA EGRPDPAPAR ADALGRLEGA VRQPLTGIID LAAAMLKEPF
GPLGDARYRG CLAEIKASGE AMRERVGKLL DLAAVEAGSL HLEPRALDLN DVVASCVARL
QGEAARGRIV MRTSFSTDIG DLEADERSVS RAASLVIENA IRRSTAGSQI IVSTGSTERA
GIAVRVRDTG AGHAPRSEAP QDDVEDGLAL PRALVEANGG RLELSARPED GTLVEIIMPT
RRAANG