| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4020 |
|---|
| Symbol | |
|---|
| ID | 6140076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 4265160 |
|---|
| End bp | 4265741 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641629730 |
|---|
| Product | autoinducer synthesis protein |
|---|
| Protein accession | YP_001756675 |
|---|
| Protein GI | 170750415 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.111702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGCGAA GGAGATCACC GACCAGGAGT TGGGAGGCTT GCCGAAGACC CGACGGGCGT
GAACGGGACC TGTTTGACGG CCCGGCCGCG TTCCACCTCC TCGGCGAGGA AGATGACGAG
ATCGTCGCCT ACGCCAGGTT CCTGCCGACG ACGAGGCCAC ACCTTCTCTC GCACCTGTAC
CCTGAGATCA TGCAAGGCGG CTCCGCTCCG AAGGGACCGG CGATCTACGA ATGGACACGC
CAAGCGATCG TCGCGAGGAG ACGTGAGATG CCGGATGCCG ACCTATTCGC CGCGGCTGTT
TCTGGTGCCA TAGCGCTGGT GGTCCATGCT CTGAATCTCG ACGGTTTGCT CATCGAGTTC
CATCCCGCGC ATATCCCGCG GCTGCTCGAC ACCGGCTGGG ATGTCCGACC GCTCGCCCTT
CCGACCTCCT ACGAAGGCTC CAAGATCGTC CCGGTCTACG CCCGGGCGAC CGGCCGCACC
CTGAATGCTG CGCAGGCGGC CTTCGCGGCT TGGCCAAGCG CTCAGCTTCG CCTGCCGCAC
GGCCTCGTGG GGCGCGGGCA GCTCGAAGCC ACAATTCAGT AA
|
|---|
| Protein sequence | MRRRRSPTRS WEACRRPDGR ERDLFDGPAA FHLLGEEDDE IVAYARFLPT TRPHLLSHLY
PEIMQGGSAP KGPAIYEWTR QAIVARRREM PDADLFAAAV SGAIALVVHA LNLDGLLIEF
HPAHIPRLLD TGWDVRPLAL PTSYEGSKIV PVYARATGRT LNAAQAAFAA WPSAQLRLPH
GLVGRGQLEA TIQ
|
|---|
| |