Gene Mrad2831_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1421 
Symbol 
ID6137441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1486941 
End bp1487483 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content74% 
IMG OID641627119 
ProductRNA polymerase sigma factor 
Protein accessionYP_001754099 
Protein GI170747839 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000131779 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCC TGGCGCGGGC GCGCTTCAGC CAGCTCGTTC TCCCGCGCCT GGACGAGGGC 
TACCGGCTCG CGCACTGGCT CACCGGCAAC GCCACCGACG CCGAGGACGT GATGCAGGAG
GCGTGTCTGC GCGCCTACCG GGCGATCGAG GGGTTCGCCG AGGGCAATGC CCGGGCGTGG
TTCCTGACCA TCGTCCGCAA CACCGGCTAT TCCTGGCTGC AACGGCACCG GCCGCGGGCG
GTGGTCTTCG CCGACGACCT CGCCCCCGAG GCCCGCGCCG AGCTGGAGAT CGGGGGCGCC
CTGACCGAGG CTCCGGAGAC GCCCGAGGCG ACCCTCATCG CCCGCGACGA TGCGGGGCAG
CTCGCCCGGG CCGTCGAGGC CCTGCCGGTG GCCTTCCGCG AGGCGCTGGT CCTGCGCGAG
TACCACGGCC TCAGCTACCG GGAGATCGCC ACGGTGACGG GGGTCCCGAT CGGGACCGTG
ATGTCGCGCC TCGGCCGCGC GCGGCAGCAC CTGCTTGCAC GGCTCGCGAG GGACGGGCGA
TGA
 
Protein sequence
MTTLARARFS QLVLPRLDEG YRLAHWLTGN ATDAEDVMQE ACLRAYRAIE GFAEGNARAW 
FLTIVRNTGY SWLQRHRPRA VVFADDLAPE ARAELEIGGA LTEAPETPEA TLIARDDAGQ
LARAVEALPV AFREALVLRE YHGLSYREIA TVTGVPIGTV MSRLGRARQH LLARLARDGR