| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0573 |
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| Symbol | |
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| ID | 6136586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 618482 |
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| End bp | 620461 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641626280 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001753267 |
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| Protein GI | 170747007 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA AGGCAACGGA ACGGGACGAG ACGGACGCTG CCCCCGAGCA GCAGACCGAC
GGGCCGCTCC TCGACCTGAC GGATGCTTCG GTCAAGCGGA TGGTCAAGCT CGCCAAGAAG
CGCGGCTACG TGACCTACGA GGAGGTCAAC GAGGTTCTGC CCGAGGGCCA GTCCGATCCG
GACCAGCTCG AGGACGTGCT GTCGCAGCTC TCCGAGATGG GCATCAACGT CGTCGAGGCC
GAGGAGACCG ACGAGGCCGC CGGCGAGAAG GCCGCGGACG GCGAGGAGGA GGAGGCCGAA
GGCGGCGAGG TCGCCGAGGT CGCTCCGGCG CGCGCCGTCG CGGTCGCCAC GACCACCAAG
GAGCCGACCG ACCGCACCGA CGATCCGGTG CGCATGTACC TGCGCGAGAT GGGCTCGGTG
GAGCTCCTGT CCCGCGAGGG CGAGATCGCG ATCGCCAAGC GCATCGAGGC CGGCCGCGAG
GCGATGATCG CGGGTCTCTG CGAGAGCCCG CTGACCTTCC AGGCGATCAT CATCTGGCGG
GACGAGCTCG TGGAGGGCAA GGTCCTCCTG CGCGACATCA TCGACCTCGA GGCGACCTAC
GCGGGCCCGG ACGGCAAGAA CGCGCCGCAG CTCGCCGAGG GCGAGGAATC CGAGGACGGC
GAGCCGCCGG CGCCCCCGGA GGGCGGCGAC GACGAGGACG ACCTCGAGAA CAACGTCTCG
CTCGCCGCGA TGGAGGCGGA GATCAAGCCG CGGGTCCTCG AGACCTTCGA CGCGATCGCC
GCGAACTACC GCAAGCTGCG CAAGTTCCAG ATCGAGGGCA CCGAGCGCAA GGCCGCCGGC
GAGCAGAACA CGCCCGCTCA GGACCAGAAG CAGGCCGAGC TGAAGGACAT CGTCGTCGCC
GACGTGAAGT CCCTCTCGCT GAACAACAAC CGCATCGAGG CGCTGGTCGG CCAGCTCTAC
TCGATCAACA AGCAGCTGAT CGGCCACGAG GGCCGGCTGA TGCGCTTCGC CGAGAGCCAC
GGCGTGGCCC GCGACGAGTT CCTGCGCCAC TACCAGGGCT ACGAGCTCGA CCCGAACTGG
ATGGAGCGCG TCGGGACGCT GGGCGGCAAG GGCTGGAAGA ACCTGGTCGA GCGCGGCTCG
AAGCAGGTCG CGGAGCTGCG CGCGCAGATC CTCGACCTCG CCTCCGAGAC GGGCCTGGAG
ATCGGCGAGT ACCGCCGCAT CGTCAACATG GTCCAGAAGG GCGAGCGCGA GGCCCGGCAG
GCGAAGAAGG AGATGATCGA GGCGAACCTG CGCCTCGTGA TCTCGATCGC CAAGAAGTAC
ACGAACCGCG GCCTGCAGTT CCTGGACCTG ATCCAGGAGG GCAACATCGG CCTGATGAAG
GCGGTCGACA AGTTCGAGTA CCGGCGCGGC TACAAGTTCT CGACCTACGC CACGTGGTGG
ATCCGGCAGG CGATCACCCG CTCGATCGCC GACCAGGCGC GCACGATCCG CATCCCGGTG
CACATGATCG AGACGATCAA CAAGATCGTC CGCACCTCGC GCCAGATGCT GCACGAGATC
GGCCGCGAGC CGACCCCGGA GGAGCTGGCC GAGAAGCTGG CCATGCCGCT GGAGAAGGTC
CGCAAGGTCC TGAAGATCGC CAAAGAGCCG ATCTCCCTCG AGACGCCGAT CGGCGACGAG
GAGGACAGCC ATCTCGGCGA CTTCATCGAG GACAAGAACG TCGTCCTGCC GATCGACGCG
GCGATCCAGT CGAACCTGCG CGAGACCACG ACGCGCGTGC TGGCCTCGCT CACGCCCCGC
GAGGAGCGCG TGCTGCGCAT GCGCTTCGGC ATCGGCATGA ACACCGACCA CACCCTCGAG
GAGGTCGGCC AGCAGTTCTC GGTGACCCGC GAGCGCATCC GCCAGATCGA GGCGAAGGCG
CTGCGGAAGC TGAAGCACCC GTCGCGCAGC CGGAAGCTGA GGAGCTTCCT GGACAACTGA
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| Protein sequence | MATKATERDE TDAAPEQQTD GPLLDLTDAS VKRMVKLAKK RGYVTYEEVN EVLPEGQSDP
DQLEDVLSQL SEMGINVVEA EETDEAAGEK AADGEEEEAE GGEVAEVAPA RAVAVATTTK
EPTDRTDDPV RMYLREMGSV ELLSREGEIA IAKRIEAGRE AMIAGLCESP LTFQAIIIWR
DELVEGKVLL RDIIDLEATY AGPDGKNAPQ LAEGEESEDG EPPAPPEGGD DEDDLENNVS
LAAMEAEIKP RVLETFDAIA ANYRKLRKFQ IEGTERKAAG EQNTPAQDQK QAELKDIVVA
DVKSLSLNNN RIEALVGQLY SINKQLIGHE GRLMRFAESH GVARDEFLRH YQGYELDPNW
MERVGTLGGK GWKNLVERGS KQVAELRAQI LDLASETGLE IGEYRRIVNM VQKGEREARQ
AKKEMIEANL RLVISIAKKY TNRGLQFLDL IQEGNIGLMK AVDKFEYRRG YKFSTYATWW
IRQAITRSIA DQARTIRIPV HMIETINKIV RTSRQMLHEI GREPTPEELA EKLAMPLEKV
RKVLKIAKEP ISLETPIGDE EDSHLGDFIE DKNVVLPIDA AIQSNLRETT TRVLASLTPR
EERVLRMRFG IGMNTDHTLE EVGQQFSVTR ERIRQIEAKA LRKLKHPSRS RKLRSFLDN
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