Gene Mpop_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4212 
Symbol 
ID6311563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4504799 
End bp4506232 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID642652901 
Productsugar transporter 
Protein accessionYP_001926859 
Protein GI188583414 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATG GAGTCATGGC GCCGGACACG GTCGCCCTCG ATTTGCCGGA ACTCGGCAAG 
GGCCGTCACA CCGCCCGGCT CAGCCTGATC GGCGTGATCG CCACCTTCGG CGGGCTGTTG
TTCGGCTACG ACACCGGCGT GCTGAACGGG GCGTTGCCCT ACATCGCCGA CTATTTCCGC
CTGTCGCCGC TTCAGGAGGG GCTGGTCACC TTCAGCCTGC TGATGGGCGC AACCCTCGGC
GCCTTGGTCA GCGGCCGGAT CGCGGACCGG ATCGGCCGTC GCGCCACCAT CACCGGCCTT
GGAGCGCTGT TCTTCGTCGG CGCGCTCGGC TGCGTCGTGG CGCCGACCTA CCACATTCTC
ATCGCGTTCC GCGTGGTGCT CGGCCTCGCG GTGGGCGGTG CGTCGGTCAC GGTGCCGGTC
TACCTCTCCG AGGTCGCGCC CACGGAGCAG CGCGGCAGCA TGATCGGCCG CAACGACATC
ATGATCGTGT CGGGCCAATT CCTGGCCTTC CTGTTCAACG CCATCATCGG CAACCTGCTG
GGTGACAGTG ATTCCGTCTG GCGCCTCATG CTCGCCGTCG CACTCTTGCC CGCCATCGTC
CTGTTCGTCG GGATGCGTCG GATGCCCGAG AGCCCGCGGT GGCTGATGGC GCAGGGCCGC
TCCGCCGAGG CGCTCCAGGT GCTGCGAACG GTCCGCTCCG AGGAGCGCGC GCAGGCAGAG
ATGGAGGAGG TGCGCGCCCT CACGAAGATT GACGCGGTCG CGCGCTCGAC GGGTTGGCGC
GACCTCCTGG CGGAACCGTG GTTGGTCCGC CTGCTCTTCG TCGGAATGGG CCTCGCGGCG
CTGGCGCAGC TCACCGGCAT CAACTCGGTG ATGTATTACG GGACGCAGGT GTTGGAGCAG
GCGGGCTTCA CCCGGAACAC CGCCCTGATC TTCAACGTCC TGAACGGCGT CATCAGCATC
GTCGCGATGC TGATCGGCGT GGCGGTGGTC AACCGCGTCA ACCGCCGCAC GATGCTGATC
CTCGGCTTCG GCTGCGTGAC GGCGCTCCAC GTCTTTATCG GCGTGACCGG CATCGTGCTG
CCCATCGGCA ACCCGATCCG ACCCTATCTT CTGACCGTCG GAATGCTCGG CTTCCTGGGC
TTCGTGCAGG GCACGATCAC ACTCGTCGGC TGGATCGTGA TGTCGGAGAT CTTTCCGCTG
CGTGTCCGCG GACTGATGAT CGGCGCGAGC GTCGCCGTTC TCTGGCTGAC CAACGCGCTG
ATTTCGCTTG TTTTTCCTCC CGTTGTGCAG GCCCTCGACT TCGCGACGTT CCTGTTGTTC
GGCGGCTGCT GCCTGTTCGG GGTGATCTTC ACCGCACGCT GGCTGCCGGA GACGCGGGGC
CGAAGCCTCG AATCGATCGA AGCCGAACTG GCGACGGGAG GCCCCCGTGC CTGA
 
Protein sequence
MSHGVMAPDT VALDLPELGK GRHTARLSLI GVIATFGGLL FGYDTGVLNG ALPYIADYFR 
LSPLQEGLVT FSLLMGATLG ALVSGRIADR IGRRATITGL GALFFVGALG CVVAPTYHIL
IAFRVVLGLA VGGASVTVPV YLSEVAPTEQ RGSMIGRNDI MIVSGQFLAF LFNAIIGNLL
GDSDSVWRLM LAVALLPAIV LFVGMRRMPE SPRWLMAQGR SAEALQVLRT VRSEERAQAE
MEEVRALTKI DAVARSTGWR DLLAEPWLVR LLFVGMGLAA LAQLTGINSV MYYGTQVLEQ
AGFTRNTALI FNVLNGVISI VAMLIGVAVV NRVNRRTMLI LGFGCVTALH VFIGVTGIVL
PIGNPIRPYL LTVGMLGFLG FVQGTITLVG WIVMSEIFPL RVRGLMIGAS VAVLWLTNAL
ISLVFPPVVQ ALDFATFLLF GGCCLFGVIF TARWLPETRG RSLESIEAEL ATGGPRA