Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3940 |
Symbol | |
ID | 6312208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4193902 |
End bp | 4195083 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642652642 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_001926602 |
Protein GI | 188583157 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0755374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAG CCCACGCATT CTTCGATCGG CTGATCGGCT GGATCGTCCA GTGGCCCTGG TGGGTCGCGA GCCCGATCCT GATCGCCGGC TGCTGCGCGC TGGTGCTGCC CCTGCACGGG GTGGCCTACC GCTTCGCGCA GAGGGCGGTG AGCGGGAAGA GCCTGTTCTG GCGCTCGCTG GTCTCGCGCA CCCGGGGGCC CAGCCGGCTC GCCCTGCTCG TCGTGACCCT GGCGCTCGCG GTCTCGACCA CGCCCCTGAC CTGGGAGATC CGGCTCGTCC TCAATCAGGT GCTCCTCGTC GCCTTCGTGA CGCTCGCGGG CTGGACCTGC GCCACGGCGA TCCACATCGC CACCGTGATC TACCTGCGCC GGTTCAAGCT CGACGCCGAG GACAACCTGC TCGCCCGCAA GCACTTCACC CAGATGCGGA TCCTGGAGCG GGCGGCGCTG ACCCTGGTGG CCATCGTCAC CATCGCCATC GCGTTGATGA CCTTCGAGCC GGTGCGGCAA TACGGGGTCA GCCTGCTCGC CTCGGCGGGC GCCGCCGGGC TGATCCTCGG GCTCGCCATG CAGCCGGTGC TCTCCAACCT CGTGGCGGGC ATCCAGATCG CCATCACCCA GCCGATCCGG ATCGAGGACG CGATCATCGT CGAGAACGAG TGGGGCTGGG TCGAGGAGAT CACCGCGACC TACGTGGTCG TGCGGTTGTG GGACTGGCGC CGCCTCGTGC TGCCGCTGAC CTACTTTATC CAGAAGCCGT TCCAGAACTG GACCCGGGAG GGCGCCTCTC TGATCGGCTC CGTGTTCCTC TACGTCGATC ACCGGGCGCC GATCGAGGCG ATGCGCACCG AACTCCGGCG GATCGCGGCG TCGTCCCGGC TGTGGGACGG CAACGTGGTC AACCTGCAGG TCTCGGACGC GCGCGAGGGC GTGATCGAGC TGCGGATGCT GGTGAGCGCC CGCAACGCCC CCCAGACCTG GGACCTGCGC TGCGAAGTGC GCGAGAAGAT GATCGGCTTC CTCCAGAAGG AGCACCCCTC CGCCCTGCCG CGCCAGCGCG CGGAATGGGT GAACCCCGAT CCCGCCTCTC CCGACCGCCA GGCCCCCCCT ACGGCCGGCA ACGAACCCGG CCTTCGCGGC GAGCGCCCGG TCCGGAGCGA CCCGCGCGCC GCAGCCGCCT GA
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Protein sequence | MAEAHAFFDR LIGWIVQWPW WVASPILIAG CCALVLPLHG VAYRFAQRAV SGKSLFWRSL VSRTRGPSRL ALLVVTLALA VSTTPLTWEI RLVLNQVLLV AFVTLAGWTC ATAIHIATVI YLRRFKLDAE DNLLARKHFT QMRILERAAL TLVAIVTIAI ALMTFEPVRQ YGVSLLASAG AAGLILGLAM QPVLSNLVAG IQIAITQPIR IEDAIIVENE WGWVEEITAT YVVVRLWDWR RLVLPLTYFI QKPFQNWTRE GASLIGSVFL YVDHRAPIEA MRTELRRIAA SSRLWDGNVV NLQVSDAREG VIELRMLVSA RNAPQTWDLR CEVREKMIGF LQKEHPSALP RQRAEWVNPD PASPDRQAPP TAGNEPGLRG ERPVRSDPRA AAA
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