| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3717 |
|---|
| Symbol | |
|---|
| ID | 6312113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3965622 |
|---|
| End bp | 3966929 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642652435 |
|---|
| Product | HipA domain protein |
|---|
| Protein accession | YP_001926396 |
|---|
| Protein GI | 188582951 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.880345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTA GCTGCTACGT CTACGTCACC CTGCCCGGCC GGACGAATCC CGTCGTCGCC
GGCCGACTGG ATGTCGCGCC GACGCGGGAC GGCGGCCAGG TCGGGCGCTT CGTCTACGGC
AAATCCTATC TCGCCCGACC CGAAAGGGTG GCCATCGACC CGACCCGACT TGCAGTCTTG
GACGGGAGCG TCAGACAAAA CGCCGGCGCG AGCCCCATCT TTCCGTCTCT GCGCGACGCG
GCACCCGACC GTTGGGGCCG GCTGGTGATC GAACGGGAGT ACGGGGGCGA ACTCGACGAG
TTGGGGTATC TCTTGAACTC CCCGGACGAT CGGGCCGGCG CGCTCGGCTT CGGCCTGAGC
CCCGAGCCGC CCGCACCGCT CCGGAAGTTC AACAGGACGC TGCAGCTACC CGAGCTGCTC
GACGCCGCCG ACGTCCTGTT GGCTGGGGGC GCGGGCGACG ACCGAGCCGT CACCCGCCAG
GTCGAGAAGC TGCAACTCTT GGGGACGTCG ATGGGCGGGG CGCGGCCGAA GACGGTCGTC
GAGGATGACG AGGGCCTTTG GCTGGCGAAG TTCAGCCGAC CGGACGACGC CTGGGACAAC
CCGCGCGTCG AACATGCCAT GCTCGAATTG GCGGCGGAGG TCGGCCTGTC GCCGGCGCGA
TCCAAGGTGG TCCAGGTCGG CGGCCGGCCG GTGCTGTTCG TCAAGCGCTT CGACCGCGAA
CGTGTCGAGG GCGGCTATCT CCGCCATCGG ATGATCAGTG CGGTGACCTT TCTGGATGCG
AGCGAGACCT CGTCGGACCG GTCGCGCTGG TCCTACCCAC TCCTCGCCGA CGAACTTCGT
CGCACCGATA TCGACCAACT CGCGTCGCGC CGGGAGGTGT TCCGGCGGAT GACCTTCAAC
GCCCTCATCT CGAACGTCGA CGACCATCCT CGAAATCATG CGCTAATCGC GGACGCACGC
GGTTGGCGCC TCGCGCCGGC CTACGATCTC GTGCCGACGC CGATGGTGGC CCAGGACGGG
CGAACGCTGG CCATGCAGGT GGGCAGCCAC GGCCGCGTGG GCACCCGCGA CAACCTTCTG
ACGGAGTGCG CGCGCTTCGG ACTCGATCGC GAGGAGGCTT CGCGCGTCGT CGACGACATG
CGGACGGCCG TCTCGAACCG ATGGTACGCG GCCTGTCGCG GGACGGGCGT GTCGCCCGAC
GATTGCGAGC GCATCAGGAG CGCGTTTGTC TATCCCGGCT TCCAGTGGGT CGATGGGCCC
GACGACGAGT ACGACGCGTC GTCGGGAGCG AGCCTCCCGA GCCCCTGA
|
|---|
| Protein sequence | MTSSCYVYVT LPGRTNPVVA GRLDVAPTRD GGQVGRFVYG KSYLARPERV AIDPTRLAVL
DGSVRQNAGA SPIFPSLRDA APDRWGRLVI EREYGGELDE LGYLLNSPDD RAGALGFGLS
PEPPAPLRKF NRTLQLPELL DAADVLLAGG AGDDRAVTRQ VEKLQLLGTS MGGARPKTVV
EDDEGLWLAK FSRPDDAWDN PRVEHAMLEL AAEVGLSPAR SKVVQVGGRP VLFVKRFDRE
RVEGGYLRHR MISAVTFLDA SETSSDRSRW SYPLLADELR RTDIDQLASR REVFRRMTFN
ALISNVDDHP RNHALIADAR GWRLAPAYDL VPTPMVAQDG RTLAMQVGSH GRVGTRDNLL
TECARFGLDR EEASRVVDDM RTAVSNRWYA ACRGTGVSPD DCERIRSAFV YPGFQWVDGP
DDEYDASSGA SLPSP
|
|---|
| |