Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3685 |
Symbol | |
ID | 6311962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3928206 |
End bp | 3929402 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642652406 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001926367 |
Protein GI | 188582922 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.186863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC CGCGGAGTCT TATTGCATGC GTGCTCATGA TCGCGCTCTC GGCCTGCAAT CAGAAGCAGG CCGTAGCCCC GTTGCCGGCC GGCTTGCCGG AGGTAAGCAT CGTCACTGTT CGGGCGCAGC CGGTCCCATA CGTGAGAAGC CTTCCCGGCC GGGTCGCTCC GCTTCGGGTC GCGGAGGTGC GCTCCCGAGT TTCCGGACTC ATAATCAAGC GTCTGTTCGA GCAAGGCAGC CACGTCAAGG AAGGCGACAT CCTCTACAAA ATCGATCCGG CTCCCTACGA GGTCGAGCTC GCGCGAAGCG AGGCGGAACT GGCCAAAGCC GAGGCAGCCC TCACCCTCGC GACACAGCAG GCGGACCGCC TTGGGCTTCT TCTCGCGCGA GGTACCGCGA GCCAAGCGCA GTATGATGGT GCCTCCGCGG CACAGAAGCA GGCTCAGGCG GAAGTCGCAG CGGCGAAGGC CATGCGCGAT AGGGCCAAGT TGAACCTCGG CTACACCGAC GTACGCGCTC CCATCTCGGG TCGTATTGGG CGAGCGCTGC TCACGGAGGG TAATCTCATC GAGCAAGGCA GCGGGCAGGT GTTCGCCACC ATCCAGCAGC TCGATCCGAT CTACGTCGAC ATCACTCAGT CGGTCGGTGA ACTGAACAAG ATCCGGCGCG ACCTTGCGAG AGGCGAGCTA CTAAGCCTTG CGAACGATGT CGCCAATGTC GAGCTCATCT TGGACGATGG AACGGTCTAT GGCCAAACCG GCAAACTCCT ATTCTCCGAT GTGACGGCCG ATCCGAGCAC CGGCCAAGTC ACCATGCGCG TGCTGTTCCC CAATCCCCGG GACGAGCTGT TCCCTGGCAT GTACGTGCGG GCGCGCCTTC CGCAGGGCAT CGACGCGGAC GCCATCGTCG TTCCTCAGCA GGCGGTGCAC CGCACCAGCG ACGGCAAGCC TGAGGTTTGG GTCGTCCGCG ACGGTGATAA GGTCATCCTC CATCCAGTGG AGGTCGGGCC GGTAACCGAC GAGGGGTGGA TCGTCCGCGA AGGCCTCAAG TCAGGCGACC GCGTCGTCGT CGAGGGATTC CAGAAAATCA GTCCAGGAAC ACAGGTGAGA CCCGTGGAAT GGAAGCTCGT CCTCCCCGGC GGAACCGAGT TTGTTCCGCC TGAGAGTACC CTCTCTGAGA CAGCGCTGCA GTATTGA
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Protein sequence | MIKPRSLIAC VLMIALSACN QKQAVAPLPA GLPEVSIVTV RAQPVPYVRS LPGRVAPLRV AEVRSRVSGL IIKRLFEQGS HVKEGDILYK IDPAPYEVEL ARSEAELAKA EAALTLATQQ ADRLGLLLAR GTASQAQYDG ASAAQKQAQA EVAAAKAMRD RAKLNLGYTD VRAPISGRIG RALLTEGNLI EQGSGQVFAT IQQLDPIYVD ITQSVGELNK IRRDLARGEL LSLANDVANV ELILDDGTVY GQTGKLLFSD VTADPSTGQV TMRVLFPNPR DELFPGMYVR ARLPQGIDAD AIVVPQQAVH RTSDGKPEVW VVRDGDKVIL HPVEVGPVTD EGWIVREGLK SGDRVVVEGF QKISPGTQVR PVEWKLVLPG GTEFVPPEST LSETALQY
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