Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3663 |
Symbol | |
ID | 6311885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3910026 |
End bp | 3910955 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 642652385 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_001926347 |
Protein GI | 188582902 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.441292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.159999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTC TCCTCGCCGC CCTGCTTGCC GCCGCCCCGG CGTCGGCCTT CGCCCAGGAG GCGGCGCGGG ACAACATCGA TGCACTGATC GCCGAGCAGG CCCGGGCCAA CAAGGTGCCC GAATCCTTCG TCCATCGGGT GGTCAAGCGG GAGAGCAACT ACAACGCCCG GGCCAAGGGC GGCTCGGCGC TCGGCCTGAT GCAGATCAAG CACGCCACCG CCCGGGGCCT CGGCTATACC GGCGATGCGG CCGGACTGTT CGACCCCGAG ACCAACCTGA AATACGGCAT CGCCTATCTC GCCGGCGCCT ACCGTGCCGC CAAGGGCGAC CTCGAACAGG CCTACCGCTA CTACAATCGC GGCTACTACT ACGCCGCCAA GCGCCTCGGC ATCGACGCGA CGCCGCCCGA GGCCGACAGC GCGACCACCG TCGCCTCGGC CGCGCCTCCC GCGACCGCCC GCTCCGCCAA CGGCTTCGAC GGCATGTTCG CCCTGCGCGG CAGCGCGCCG GCGGCGGGCA GCCAGGCGCT CGCCTATGCG GCTCCGGGGC CGGGGCCGAC CGACGCCGTG GAGGTCCCGC TCCCGCCGCG CCGGCCCGCC GCGCTCTCCG GCGCCGCCGA TGCGGTGCAG GTCGCGAGCC TCGCGCAGCC CGCCGCTCCG CAGCCGCAGG CCGCGATCCA GAACCCGCCC CAGGCCGCCG CACTCCAAGC GGCCGCATTC CAGACCACGC CGTCCCAGTC CGCCGTGCCG CAGGCCGCTG CGCAGCTGGC ATCCGCCGCC GTGGCGGACG CCGTCGAGGT GCCGCTGCCC CCGCGCCGCC CGTCCGAGAC CGTGCTCGCC GCCATGGCCC GGCCGACCGT CGCGGTGGCG CGCAAGCCCG CCGCGCCGGC CCCGATCCTG GAGGCCTCGG CCGCCCACGG CACGCCCTGA
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Protein sequence | MRLLLAALLA AAPASAFAQE AARDNIDALI AEQARANKVP ESFVHRVVKR ESNYNARAKG GSALGLMQIK HATARGLGYT GDAAGLFDPE TNLKYGIAYL AGAYRAAKGD LEQAYRYYNR GYYYAAKRLG IDATPPEADS ATTVASAAPP ATARSANGFD GMFALRGSAP AAGSQALAYA APGPGPTDAV EVPLPPRRPA ALSGAADAVQ VASLAQPAAP QPQAAIQNPP QAAALQAAAF QTTPSQSAVP QAAAQLASAA VADAVEVPLP PRRPSETVLA AMARPTVAVA RKPAAPAPIL EASAAHGTP
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