Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0643 |
Symbol | |
ID | 6312637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 685025 |
End bp | 686458 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642649351 |
Product | MATE efflux family protein |
Protein accession | YP_001923356 |
Protein GI | 188579911 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.26876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCCT CACCGAGCCT CGCGGCCGGC GGCCTGCGGC GGCCGCCGGC CTCGCCCTGG CTCGACGAAC TGCGCGCGAC GCTGAAGCTG TCGGCGCCCC TCGTCCTCAT CAATCTCGCC CAGCATGGGC TGGTCGCGTC GAACGCGGTG CTACTCGGCC GGCTCGGCGC CGAGCCGATC GCCGCGGGCG CGCTCGCCAC CAGCCTCTAC CTCCTGCTGT TCATCGGCGG CATCGGCCTC ACCTCGTCGG TGGCGCCCCT CGTTGCGGAA GCCGTCGGAC AGGGTGCGGA GGCGGCCGGC GGGGTGCGGC GCACCGTGCG GGCGGGCCTG TGGGTCGGCT TCCTCGTGAC GCTCGCGCTG ATGCCGGGGC TCTGGTTCAC CGAGGCGCTG CTCCGCCTCC TGCATCAGGA GCCGGCGGTC GCCCGCGATG CCGGCGCCTA CATGCGGGTG CTGCAATGGT GGATGGTCCC GGCGCTCGCC TTCATGGTGC TGAAGGGCGC CCTCGCTGCA CTCCAGCGGC CGGGACCGCC GCTCGCCGTG AGCCTCGTCG CGCTGCCGCT CAATCTCGCC CTCGGCGCCT TCTTCGCCTT CGGGCCGCCC GATCTCGGCA TCGTCGGCGT GGCCCTCGGC ACCGTCATCA CCGAATTTCT GGCGATCGGC GCGCTGATCG CGGTGATCCG GCTCGACCCC AACCTGCACC GTCACCGGAT GTTCGCCCAG CTCTGGCGGC TCGACAGCGA GCGCCTCGCC CGCGTGATCC GGGTCGGCCT GCCGATGGGC GTGGCCGGCA TCGCCGAGGC CGGGCTGTTC GAGGCGGCGA CGGTCGCGAT GGGCACCTTC GGCACGCTGC CGCTCGCCGC CCATGCGGTG ACGCTCCAGA TCGCCGCGAC CTGCTTCATG GTGCCCAATG GCATCGGGCA GGCGGCGACG GTGCGGGTCG GCCGCGCCTA CGGCGCCGCG GACCGGGCGG GTCTGCGCCG GGCCGGCGCC ATCGCGCTCT GGCTCGGTTT CGGCTTCATG GTGGCCTGCG CCGGGCTGCA ACTCCTCGCC CCGCGCACGC TCATCGGCCT GTTCCTCAAT GCGGACGCGC CCGGCGCCGC CGACGTGTTT CCGGTGGCCG CCGGTTTCCT GATCTTCTCG GCCCTGTTCG CGATCTCCGA CGGCGTGCAG TCGGTGGCGC TCGGCTGCCT GCGCGGGCTT CAGGACACCA AGGTGCCGAT GCTGATCGCG CTGTTCGGCT ACTGGGGCAT CGGTGTGCCG CTCGGGGCGG CGCTGGCCTG GGGCGCCGGG ATGGGCGGGC GCGGCATCTG GGCGGGTTTC TGCGCCGGGT TGCTCGTCGT CTCCGTGGCT CTCGTGGTCC GCTGGCGGCG GCTCAGCACC GTGCGTCCGC GCGGCTCAAG CGCGCATCCG CCCGCCGGGC GGAACCGCGC CTGA
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Protein sequence | MTSSPSLAAG GLRRPPASPW LDELRATLKL SAPLVLINLA QHGLVASNAV LLGRLGAEPI AAGALATSLY LLLFIGGIGL TSSVAPLVAE AVGQGAEAAG GVRRTVRAGL WVGFLVTLAL MPGLWFTEAL LRLLHQEPAV ARDAGAYMRV LQWWMVPALA FMVLKGALAA LQRPGPPLAV SLVALPLNLA LGAFFAFGPP DLGIVGVALG TVITEFLAIG ALIAVIRLDP NLHRHRMFAQ LWRLDSERLA RVIRVGLPMG VAGIAEAGLF EAATVAMGTF GTLPLAAHAV TLQIAATCFM VPNGIGQAAT VRVGRAYGAA DRAGLRRAGA IALWLGFGFM VACAGLQLLA PRTLIGLFLN ADAPGAADVF PVAAGFLIFS ALFAISDGVQ SVALGCLRGL QDTKVPMLIA LFGYWGIGVP LGAALAWGAG MGGRGIWAGF CAGLLVVSVA LVVRWRRLST VRPRGSSAHP PAGRNRA
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