| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0232 |
|---|
| Symbol | |
|---|
| ID | 6309677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 238190 |
|---|
| End bp | 239230 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642648938 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001922953 |
|---|
| Protein GI | 188579508 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.698548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAC GCCGCGAACG CCGCGTTCCA CGGGCGGAAC GCCTGCCTGT AGACCGGGCC
GCCGACGACC TCGACTGGCA CAGCCTCCGG CTCTTCCTCC AGTTGTACCG GGCCGGTAGC
TTCCGAGCCT GTGCTGCCTC CCTGGAGATC TCGGTGAATT CGCTGCGGCG GAGGATCGAG
GCGCTCGAGG CTGCGCTTCA GCTCCCATTG TTCATCCGCA CCGTCGACGG GATCCGACCG
ACGACCGGCG GCGAGCACAT CCTGGCGGCC GCCGAGGCGA TGGAGCAGGC CGCCTTCCGG
GTCCTGCGAG CCCGAGGAAG CGTTTCGAAC GACATCGAGG GGGAGGTGCG GATCGCCGTG
ACGGAAGGTC TGGGCACGGC GTGGCTGACG CCGCGGCTCG TCGAGTTTCA GAATGCCTTC
CCGAACCTCC GGGTGGCGTT GAACTGCGCC ATGAACTCGG CCGACGTCCT CCGCATGGAG
GCCGACATCG CCGTGCAGCT GACCCGTCCC GATGCGGCCG ATGTGAAGCT CGTCCGGCTC
GGCTACCTGC ACACGATGCC GTTCGCGTCG CGAGCCTATG CGGGCCGCAA CGGCCTTCCC
ACGAACGTGG ACGAGCTCAT CAAGCATCGT CTCATCCTGC AGATCGCCGA GCAGACCTCG
CAGTTATCGA TCTTCGGGGA CATGCTGCCC CGGTTCCCCT ACCCACCCAC CGTCCCGATC
ACCACGAACA CCAGCAGCGC GCTTGCCCTG GCGATCGCGA ACGGAGCGGG CATCGGCTGG
CTCCCGACAT ACGTCAGTTC ACTCCAAACG GGTCTATTGC CCGTCGATTG CGGCCTCAAC
TTTCGCTTCG ATGTCTGGCT GACCTACCAT CCGGAAGTCG AGGTGATCCC GCGGGTGCGC
CAGACGATCA ACTGGATCAA GTCCTCCTTC GATGCGGGAC TCTATCCCTT CTTCGGAGAG
ACTTATATCC ACCCGGCCGA TCTGCCGACA GTTGACCGGC ACATCCCATT GTCCGAGCTT
TACAAAGGTT TCGTGCCCTG A
|
|---|
| Protein sequence | MPTRRERRVP RAERLPVDRA ADDLDWHSLR LFLQLYRAGS FRACAASLEI SVNSLRRRIE
ALEAALQLPL FIRTVDGIRP TTGGEHILAA AEAMEQAAFR VLRARGSVSN DIEGEVRIAV
TEGLGTAWLT PRLVEFQNAF PNLRVALNCA MNSADVLRME ADIAVQLTRP DAADVKLVRL
GYLHTMPFAS RAYAGRNGLP TNVDELIKHR LILQIAEQTS QLSIFGDMLP RFPYPPTVPI
TTNTSSALAL AIANGAGIGW LPTYVSSLQT GLLPVDCGLN FRFDVWLTYH PEVEVIPRVR
QTINWIKSSF DAGLYPFFGE TYIHPADLPT VDRHIPLSEL YKGFVP
|
|---|
| |