Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_B0595 |
Symbol | |
ID | 4787438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008826 |
Strand | - |
Start bp | 546474 |
End bp | 548894 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640093016 |
Product | RND efflux transporter |
Protein accession | YP_001023594 |
Protein GI | 124263124 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.115384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000495016 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTAGAA ATGACCTAAG GCACCGGCTC GCCCGTTTCA CTCTAGGCAA CCGATGGACA ATCCTGGTTG CCATGGCGTT GATCACGACC TTCTTCGCCG TCGGCATGAC CAAGGTCGAG ATCCGGACGA TCTTCTCGGA CCTCTTTCCC AAGGATCACC CCTTCGTTCA GGTCTTCAAG GACCATCCGA ACTTCGGCAG TCCACTGACC GTCACGCTGA TGATCAAGCG AACGGACGGC AAGGACGTCT TCCAGATCGA TACGCTTGAC AAGGTCTGGC GCCTATCGCG CGCGATCGAT CTCGCTCCCG GCGTCGACCA CGATCAGATT CTTTCGATCG CGTCGTCCAA GGCCCGGTAC ACGGTCGTCA CCCCGGACGG GATCTTCTCG AACCCGATCA TGGACGAACA GCCGCCTAAG TCGGCCGCAG ACCTGGCGGA GATCCGTCGC CGGGTAGGTG AGTCGGCGGC CGCGGCAACG TTCCTCGTGT CCTCTGACCA CACGGCGACG ATCATCAATG CCACCTTTAT CGAGAGCAAG CTTGACTACG GCGAGGCGTT CAACTTCATC CAAGAGATAG TCAAGAAGGA GCAGGACGGT CAGCATGAGA TCCACGTCGC CGGCTTCCCG ATCATGACCG GTTGGATCTA TGCCTTCGGC GAGAACACCG CTGAGATTTT TGGCCTCACG CTGCTCCTCA TGTTCGTGAT GCTCGCACTC CACATGCGCA ACCTTTCGGG CATCGTTGGA CCGCTGATCG TGAGTTCGGT GTCGGCCGTC TGGGGGTTCG GGCTTGTCGG CTGGCTCGGA CTACCGGTCG AGCCGCTGCT GATGGTTGTG CCCCTGATGC TCATCGCGCG CTGCTTCAGC CACTGTGTTC AGGCTACTGA GCGCTACTAC GAACTGCTTC ACGACGGCCA TGAGCAGCGC AAAGCTGCCG AGCTGTCGCT CGTCTCCCTT ATGGCGCCCG GCACCCTAGG GATCTTCACC GACGTTTGCG GACTTCTGCT TGTCGCGCTT GCGCCCATTC CGGCGATGGA GCGATTCGCA CTGTTCACCG GCCTTTGGGC GCTGAACCTC GTCCCCTGTA GCGTCTTCCT TACCCCCGTC GTGCTGAGCC TGCTGCCGAA GCCAACGAAC CTATCTCATG TCCTCGGCAG CGTTGGTCAC AGCGGCCCGC TTCAACGCAG CATGCGGCGC ACGCTGGAGG CGTTCTCCAG CTTGGCTCAT GGGCGGACGG CATGCTACAC GGCAGGCATA TTTGTCTTAA TTACTGTGGT TTCGGTGTAC TTCATGTTGC GCATCCCGGT CGGCAATCCG GTCGAAGGGA CGAATCTCCT GCGTTATGAG TCGGAGTTCA ATGCCGCCGT CCGGGAGATC AACAGGAACT TTCCCGGATC GATGACGATG GAGCTTGTCT TTGAGGGCAA GGGCGGCGCC CGCATCGTGC GTCAGACCGA GACAATCACC GCGATGCGAG ATCTCCAGCA TTGCCTGGAG GCCAGCCCAA ATCCGCCCAC AGCCACGCTG TCGTTCGCCG ACCTCGTGCC GGAAGCCAAC CGCGTCTTCA ACGGCGGCAA TCCAAAATGG ACGCCGCTGG ACAACGACGA TGCCGCCGTC GCGGCAGCGG TCACGGGCCT GATGGCAGGA ACGAATGCCA AGGCCTTCCT GAACGTCACG GACTTCGACC AGCGCAACAC GACCGTATCG CTCTGGTACG CCAACAACAA GCAGCATACG GTAGACAACG CCTTAGCTCA GGCGAGTGCT TGCGTTGAGA AGATTGGAGC AGAGCATACA AACTTTCGCG TTCGCTTGGC TTCCGGCACG ATCGCTTTGC AGCAGTCGAT CAACGACACG GTGGTGCACT ACGAGTCTCG AATCATCGGC GCGCTAAATA TCGTGATTCT CATCGGCTGC TCCCTGGCCT ATCGCTCGAT CGTGGCCGGT TTGCTGCTGC TGATCCCGGT GAACCTGGCT AACACCATGC TCACGGCCGC GATGTCTCTC GCCGGCCTCG GGCTCGACGT GAACACGCTG CCCATCCTGG CCATCGGAAT CGGAGTCGGC ATCGACTACG GCATCTACTT GCTCACGCGG ATCTGCGAAG AATACCAGGG GGCGGCCAGG AAGGATCTCG GAGCGGCCAT CCGCATTTCG CTTGCGACCT GCGGCAAGGC CATCTTCTTC ACCGCGGCAT TGATGACCAT CGGGCTGTTG CCCTGGTACT TCCTGTCGGA GCTGAAGTTT CTGTCCGACA TGGGTCTGCT GCTCGTGATT GTGATGTTTA TCAACATGGT CCTGGCGCTG ATCCTCCTTC CGCTGCTCGT CTACTTGATC AAACCGAAGT TCCTCGACAG CGACATGTCG GGATTGTCGG AGTCCGTGGA GAAGAGACCA CAGATGGCGG TACCTGTCTA A
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Protein sequence | MGRNDLRHRL ARFTLGNRWT ILVAMALITT FFAVGMTKVE IRTIFSDLFP KDHPFVQVFK DHPNFGSPLT VTLMIKRTDG KDVFQIDTLD KVWRLSRAID LAPGVDHDQI LSIASSKARY TVVTPDGIFS NPIMDEQPPK SAADLAEIRR RVGESAAAAT FLVSSDHTAT IINATFIESK LDYGEAFNFI QEIVKKEQDG QHEIHVAGFP IMTGWIYAFG ENTAEIFGLT LLLMFVMLAL HMRNLSGIVG PLIVSSVSAV WGFGLVGWLG LPVEPLLMVV PLMLIARCFS HCVQATERYY ELLHDGHEQR KAAELSLVSL MAPGTLGIFT DVCGLLLVAL APIPAMERFA LFTGLWALNL VPCSVFLTPV VLSLLPKPTN LSHVLGSVGH SGPLQRSMRR TLEAFSSLAH GRTACYTAGI FVLITVVSVY FMLRIPVGNP VEGTNLLRYE SEFNAAVREI NRNFPGSMTM ELVFEGKGGA RIVRQTETIT AMRDLQHCLE ASPNPPTATL SFADLVPEAN RVFNGGNPKW TPLDNDDAAV AAAVTGLMAG TNAKAFLNVT DFDQRNTTVS LWYANNKQHT VDNALAQASA CVEKIGAEHT NFRVRLASGT IALQQSINDT VVHYESRIIG ALNIVILIGC SLAYRSIVAG LLLLIPVNLA NTMLTAAMSL AGLGLDVNTL PILAIGIGVG IDYGIYLLTR ICEEYQGAAR KDLGAAIRIS LATCGKAIFF TAALMTIGLL PWYFLSELKF LSDMGLLLVI VMFINMVLAL ILLPLLVYLI KPKFLDSDMS GLSESVEKRP QMAVPV
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