Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_B0349 |
Symbol | traU |
ID | 4787977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008826 |
Strand | + |
Start bp | 300963 |
End bp | 302024 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640092781 |
Product | conjugal DNA transfer protein |
Protein accession | YP_001023359 |
Protein GI | 124262889 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.469049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTACA TGTTCCGCAT CAACATCAAG CCTCTGCGCA GCGCCGCCAT GGCGGTGCTG GCCGCCGTCG CCGCCATCGC ATCGAGTCCG GCTTCCGCTG ACTCTATGTG CCAGGGCAGC TTCCCCAACC TGATCACGGA CGTCTGCTGG TCGTGCACGT TCCCGCTGAA GCTGTTCGGC CAGGCGGCGT TCGACAGCGC TGGCGGCGAG GACTACGCGT CCTCCGACAA GACGTCGGTG TGCACCTGCA AGAGCCCGCC CACGGTCGGC ATCCCGACGA GCTTCTGGGA GCTCAACCAG ATGACGGACG TGACCACCAC GCCCGGCTGC TTCCCCATGC TCGGTGGAGC GAAGGTGAAC GTGGGCGTGA ACGCCGACGC CTATGGTCAC AACGGCAACA ACGAGCAGGG TGGCATGGCC CAGGCACGCG AGTCGTTTCG CCAGGTCAAC CTGTACATCA ACCCCGCGAT GTACATCATG GGTGCCGTGC TGGACAACTC CTGCATGGAC AACCGCGGCA TCGACATCCC GTGGGTGAGC TTCGCGGACC CGACGCACAA CGACGAAGAG CTCGCGAACA TCCTGACCCC GTACGCGTTC CCGTTCGGCT CGATGGTCGC GATCGGCGCC ATGTCGGCCG ATGCTGTCGC AGCCACCGCG GGCTTTCCGA TCCCGGAGAT CTTCTGGGCG GCGGGTTCGT TCGGCCCGAT GTACCCGCTA ACAGGCACGA ACCAGGCGCA CCTTTCGAAT GAGCAGTCCG CGCGCCTGCA GACCACGCGC GTGCTGGCCA AGCTGCATGC CGCCGGCACG CAGTGGGCGG CCGCGGGCAA CGACGCGATG TGCAGCTACT ACCCACAGAT CATCATGGAC AAGCGCCAGT ACAAGCTGCA GCGCCTGTAC CCGCGTCCGC AGACGGAGAA GATCAACGGC AAGTGCTGCG ACCCCATCGG CCGTACCACC ATCCTCACCG AGTCGGGCAC GGAAGCCCCG CTCTCCACCT TCAGGGACTT TGGCTATGCG ATTTTCCGCA AGCGCGATTG CTGTTCTGGC GCTTTCCCTT GA
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Protein sequence | MTYMFRINIK PLRSAAMAVL AAVAAIASSP ASADSMCQGS FPNLITDVCW SCTFPLKLFG QAAFDSAGGE DYASSDKTSV CTCKSPPTVG IPTSFWELNQ MTDVTTTPGC FPMLGGAKVN VGVNADAYGH NGNNEQGGMA QARESFRQVN LYINPAMYIM GAVLDNSCMD NRGIDIPWVS FADPTHNDEE LANILTPYAF PFGSMVAIGA MSADAVAATA GFPIPEIFWA AGSFGPMYPL TGTNQAHLSN EQSARLQTTR VLAKLHAAGT QWAAAGNDAM CSYYPQIIMD KRQYKLQRLY PRPQTEKING KCCDPIGRTT ILTESGTEAP LSTFRDFGYA IFRKRDCCSG AFP
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