| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3246 |
|---|
| Symbol | |
|---|
| ID | 4786525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3449854 |
|---|
| End bp | 3451188 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091819 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022434 |
|---|
| Protein GI | 124268430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0143918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACGA CCCCGATCCC TCCCGCCGCT GCGGCCCGGC CGCCCGCGGC GGAACCGCGC
ACGCAGTTCT TCGACGAGGC GCGCGCCGCC CTCGCCGACC ACCGCCTCGT CAAGATGGTG
CTGGCCGGCC CGCGCGGGCC CCGGCCCGAC CTGCAGCGCG TGCTGGTGCG GCCGCTCACG
CTGAAGGGCC GCGCCTGCCT GTCGCTGACC TACAACCACC GCACGAAGGA CGTGACGAAG
AACCTGCCGG TCGAGGAGGG CCTGTCCACG GTGGCCGAGC TGATCGACAG CGCCTTCGAC
AACCTGCACC TGCTGACCCC CGACGGCGAA CTGCAGCTCG CCATCAGCCG CAAGGGCAAG
GCCACGCTGC GGCGCAGCCG CAAGCCCGCC GCGCCGGCCG ATGCCGCCGC CGAGAACCCG
GAACAGCCCT CCGCACTGGC GAACGGCGGG TCCGACGCGC CGACGGCCGC ACCGCCTTCG
CACGACCGCG AGAAGCACCG CTACGTCGAC CCGCAGCAGC CCTTCCTCGT CGCCCTGGGC
GTCACCGACG CCCAGCACCG CGTGGTGCCG GCCATGGCAC GCAAGTGGAA GCAGATCAAC
AAGTTCATCG AGGTGCTGGC CCACGCGCTG GCGTCGGCTC CGTCGCTCGC GCAGGCTCAG
GGTGAGCAGC CGCTGCAGGT GCTGGACTTC GGTGCCGGCA AGGGCTACCT CACCTTCGCG
GTGCACGACC ACCTGCGCCG CACGCTGCAC CGCCCGGTCC GGGTCACCGG CGTCGACCTG
AAGGACGACA TGGTCGCTCT GGGCAACGCC ACCGCGCAGC AGCTCGGCCT GGACGGCCTG
TCCTTCGAGC TGGGCGACGT GCGCAGCTAC GCGGCCCGGC CGGTCGACAT CATGATCGCG
CTGCACGCCT GCGACATCGC CACCGATCAC GCGATGCACA TGGGCATCCG CTCGGGCGCG
CGCATCATCA TGTGCTCGCC TTGCTGCCAC AAGCAGCTGC GCCCGCAGCT GCGCAGCCCC
ACGCTGCTGC TGCCGCTGCT GCGGCACGGC ATCCACCTCG GCCAGGAGGC CGAGATGCTG
ACCGACGGCC TGCGCGCGCT GCTGCTGGAG GCCGAGGGCT ACGACACCCA GGTGTTCGAG
TTCACCTCGC TCGAGCACAC CCAGAAGAAC AAGATGATCC TGGCGGTGAA GCGCGAGCAC
CCGAGGGCCG CCGAACCGCT GCGCGAGCAG GTGCGCGCGC TGAAGGACTA CTACGGCGTC
CAGGAGCAAT GCCTGGAGAC GCTGCTGGCG ACCGACCGCG CGGAGGCCGC GCCGCAACCC
GGCAGCGCCG GCTGA
|
|---|
| Protein sequence | MPTTPIPPAA AARPPAAEPR TQFFDEARAA LADHRLVKMV LAGPRGPRPD LQRVLVRPLT
LKGRACLSLT YNHRTKDVTK NLPVEEGLST VAELIDSAFD NLHLLTPDGE LQLAISRKGK
ATLRRSRKPA APADAAAENP EQPSALANGG SDAPTAAPPS HDREKHRYVD PQQPFLVALG
VTDAQHRVVP AMARKWKQIN KFIEVLAHAL ASAPSLAQAQ GEQPLQVLDF GAGKGYLTFA
VHDHLRRTLH RPVRVTGVDL KDDMVALGNA TAQQLGLDGL SFELGDVRSY AARPVDIMIA
LHACDIATDH AMHMGIRSGA RIIMCSPCCH KQLRPQLRSP TLLLPLLRHG IHLGQEAEML
TDGLRALLLE AEGYDTQVFE FTSLEHTQKN KMILAVKREH PRAAEPLREQ VRALKDYYGV
QEQCLETLLA TDRAEAAPQP GSAG
|
|---|
| |