| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2856 |
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| Symbol | |
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| ID | 4785550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3039356 |
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| End bp | 3041062 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640091427 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_001022045 |
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| Protein GI | 124268041 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.592717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGG CCTCGAACCC GGAAGCGTCC GCTGCACGTG CCGCGGAGCC CGCGGCTGCG
GAGTTGGCCA AGGCGGCGCT GCGCCGCCTT GCGCTGGAGC GCAAGCAACC GACGCCCGAG
AACTTTGCGT GGGCCTACCG GACGGAGCGC GGTGACGCAC CGGGGCCCGC GGCGGGGGTT
GCTGCTGCCG TGCCGGACAG CGCCGAAGGC GACGGCGAAG CGTGGGCCGC TCTGTTCCAG
AGCGCCCTGC GGGGCGTGGA GCGTGGCGGC CGCAACTGGA CCGCCGCTCG ACGCAAGGAC
AGTCTGCAGC GGGTGCTCGG GGGCAGCCGC AGTGACGCCA AGCGGCTGCA GCAAAGGCTC
AAGCAGCTCA TCGCCAGCTG GGACAGTGAT GCGCTCGACG AGGCACCGAG CGATCTGGCA
CCTTTCGACG CGGCAGCACC CGTGGGCGAC GTCGCGCCGA TGGTCGTTGC AGAGGCTTCG
CCGGCGCCCG TCTCGATGGC CTGGTCGCGC GTTGCCGCCG AACTCGGTGC GACCGTTCAG
GCGGCCTTGC CGTCGAGCGA GGCGCGCAGC CGCGAGGTGG CCGAGCGGCT TGCGCAGTTG
CAGGCGCGCA TTGCTGCCGA CGGCCCCGAT GGTGTTGTCG AAGACGTGGC GCAGGCTTGC
ACCGAGGCGC AACGGGTGTT GCAGCATCGC CAGCACCTGA CGAACCAACT GGGAGGGCTG
TGCCAGGAAC TCACCGAAGG TCTGGCCGAC CTGTCCGAGG ACGATTCCTG GGTCAAAGGG
CAGTGCGAGG TGATGCGCAG TCAGCTGTTC GAGAGCGACG GTGGCCTGAC GGCAAGGGGC
GTGCGATCAG TCAGCCAACT GCTGCTCGGT ACGCGCGAGC GCCAGCAGGA ACTGCGCGCG
GCCCGCAAGG CGGCCCGAGA TGCCTTGAAG GACTCGATCC ACGAGATGCT CGACGAGATT
GCCTCGCTGG GTGCACAGAC CGGGCGCTTC TCGTCTCAAT TGGACGGGTA CGCCGACGAG
ATCGACCGTG CCGAGTCTCT TGAGAGCCTG GCCGGGACGG TGCGACAGAT GGTGGCTGAA
AGCCGGGCAG TGCACGAAGG GGTCAGCCAG GCGCAGGCCA GACTGGCTCT GGAGCACAGC
CGATCGGCCG AGATGCAGGC GCGGGTGGTC GAATTGGAGG ACGAGATCCG TCGGCTGTCG
GACGAAGTGT CCACGGACCC CTTGACGCAG ATCGCCAACC GCCGCGGCCT GCAGCAGGCC
TTCGAGACGG AGCAGGCCAA GAACCAGCGG GCTGCACAGG GTGAGGGCGC GACGCTCGCC
GTGGCGCTGA TCGACATCGA CAATTTCAAG AAGCTCAACG ATCGGCTGGG CCATGCGAGC
GGCGATGCGG CGCTGCAGTT CCTGACGCAC CGCGTCGCGC AGGCGCTGCG CCCCGGCGAC
ACACTGGCGC GCTACGGTGG CGAGGAGTTC GTGGTGCTGC TGCCGGGCAC GCCGCTCGAC
GAGGCGCAGC GCGTGCTCAC CCGCGTGCAG CGTACGCTCA GCGCGGAGCT GTTCATGAGC
GATGAGCAGG GGCAGGTGTT CGTGACCTTC TCGGCCGGCG TCAGCCTCTA CCGGCCCGGC
GAACGGCTCG AGCAATCGCT GGAGCGCGCC GACGAGGCGC TGTACGAGGC CAAGCACAGC
GGCAAGAACC GCACCTGCGC CGCCTGA
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| Protein sequence | MGVASNPEAS AARAAEPAAA ELAKAALRRL ALERKQPTPE NFAWAYRTER GDAPGPAAGV
AAAVPDSAEG DGEAWAALFQ SALRGVERGG RNWTAARRKD SLQRVLGGSR SDAKRLQQRL
KQLIASWDSD ALDEAPSDLA PFDAAAPVGD VAPMVVAEAS PAPVSMAWSR VAAELGATVQ
AALPSSEARS REVAERLAQL QARIAADGPD GVVEDVAQAC TEAQRVLQHR QHLTNQLGGL
CQELTEGLAD LSEDDSWVKG QCEVMRSQLF ESDGGLTARG VRSVSQLLLG TRERQQELRA
ARKAARDALK DSIHEMLDEI ASLGAQTGRF SSQLDGYADE IDRAESLESL AGTVRQMVAE
SRAVHEGVSQ AQARLALEHS RSAEMQARVV ELEDEIRRLS DEVSTDPLTQ IANRRGLQQA
FETEQAKNQR AAQGEGATLA VALIDIDNFK KLNDRLGHAS GDAALQFLTH RVAQALRPGD
TLARYGGEEF VVLLPGTPLD EAQRVLTRVQ RTLSAELFMS DEQGQVFVTF SAGVSLYRPG
ERLEQSLERA DEALYEAKHS GKNRTCAA
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