| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2605 |
|---|
| Symbol | fepA |
|---|
| ID | 4783626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2778033 |
|---|
| End bp | 2780396 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091176 |
|---|
| Product | OM receptor TonB |
|---|
| Protein accession | YP_001021794 |
|---|
| Protein GI | 124267790 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0978096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGCC CTCTCGAAAC CCGGCCCGCG CGGCCCACGC GCCTGGCACG GCCGGCCCGA
TCCACACCGT CGCCGATCAC GCGCGCACTG GCCGCCCTCG GGTGGCTCGG CCTGCCGCTG
ATCGCCCTGC CCGGCACCGC TGCAGCCCAA GCCGCCGCTG CGCAGCTCGA TCGCGTGGAA
ATCATCGGTG TCTCGCCGCT GCCCGGCCAG GGCATCGACC GCAACATCCT TCCCTACTCC
ACGCAGGTGC TCAAGCGCGA CGCCATCGAC GGCGCGCAGG CCGTGAACCA GAGTGACTAC
CTGAACCGCC GCGTGGTCGG CGTGCAGGTC AACGAGATCC AGGGCAGCCC CTTCCAGGGC
GACCTCACCT ACCGCGGCTT CCGCGCCTCG CCGCTGCTCG GCGCCGGCCA GGGCCTGTCG
GTCTACCTCG ACGGCGTGCG CATCAACGAG CCCTTCGGCG ACGTCGTCAA CTTCGACCTG
ATCCCCGAGT TCGCGATCAA CACGCTGTCG CTGGTGCCGG GGGCCAACCC GGCCTTCGGC
CTTAACTCGC TGGGCGGTGC GCTGGCCTAC ACCACGCACG ACGGCCGCAG CGCGCCGGGC
TTCCGCGCCG ACCTGTCGGC CGGCAGCTTC GGCCGCAAGC GCGCGGACCT CAGCTATGGC
CGCAGCGACG ACAGCGGCTG GCACCAGTAC GTGGCCGTCA CCGGCTTCGA CGAGGACGGC
TGGCGCGACC ACTCCGACGG CAAGCTCGGC CAGTTCTTCG GCAAGCTGGG GCACGACGAC
GGCACCACGA GCTGGAGCCT CGGCGCGCTG TACGCGCAAA GCAACCTGGT CGGCAACGGC
CTGCTGCCGG CCTACACCAT CGACGACGGC GCGCTGGTCA AGGACCTGTA CTTCTCGCGC
CGCGAGTCGG TCTACACCTT CCCCGACCAG ACCCGCAACA AGCTGGGCCA GCTGAGCTTC
AACGGCCAGC ACGCGATCGA CGCCAACAGC TCGCTGGCCG CGCTGCTGTA CGTGCGCAAG
AGCTCGCGCA GCACCATCAA CGGCGACGAG GCCGAGGAAG AGCCGGACGA TCCGGGCGAT
CCGAACGCCG CGTTCAACAA CACCGCGACC ACGCAGACCG GCTACGGCGC GGCGCTGAGC
TACACGCGCG TCAGCGGGGC GCACCAGTGG CAGGTGGGCG CCAGCGTGGA CCGCTCGCGC
GTGGAGTACA GCCAGTACGA GCAGGAAGGC TTCTTCACCG ACCGCCGCGG CGTGATCCCG
GCGCCGGGCG AGGACCGCGA GCTGTCGGCC AACGTGGAAG GCAGGTCCAC CCACTACGGC
GTGTACGCCA CCGACACCTG GCAGGTCGCG CCGCGCACCC ACGTGACGGG CACCGCGCGC
TACAACCATT CGACCGTGAG CAACCAGCTC ACCACGCGCG ACGACGACAC CGGCATCATC
GAGGACAAGC CCAACGAGCG ATTCAGCTAC AACAGCGTGA ACCCGGCGCT GGGCATCGCG
CACCGCCTCG GCGACGCGGC CACCACGCCC ACGCTGTTCG CCAACGTGGC GCGCAACACG
CGCGTGCCCA CCGTCATCGA ACTCGGCTGC GCCGACCCCG ACGAGCCCTG CCGCCTGCCG
GCCGGGCTGC AGGCCGACCC ATACCTGAAG CAGGTGAAGT CGACCACGGT GGAGGCCGGC
CTGCGCTGGC CGCTCGCGCC CGGCATGCGC TTCAACCTGG CGGCCTTCCG CACCGACAAC
AAGGACGACA TCCTGTTCCG CAGCACCAGC GTGACCGGGC AGCTCGGCTA CTTCGCCAAC
TTCCCGAAGA CGCGCAACCA GGGCGTGGAC ACGGAGTTCG CGGTGACCCA CGGCGCGTTC
GACGTGGGCA TCGGCTACAG CTTCCTGAAG GCCACCTACG AGGCCAACGG CGTGCTGCGC
CAGGGCGAGC GCAACGTGAC CATCACGCCG GGCACCCGCA TCGCCGGGCT GCCGCGCCAC
ACGCTGAAGC TGGCGGTGGA CTGGCGCGTG GGCGACGGCC TCACGGTCGG CAGCGACCTG
CAGGCGGTGA CGAGCCGCGG CGTGTCGGGC AACGAGGACG GCCTGCTGGA GGACCCGGAG
GTCGGCGAGG ACCCCGAATA CAAGCGCGTG CGCCTGCCCG GCTACGCCAT CGTGAACCTG
CGCGCGAGCT GGAAGCCGAG CGCGCAGTGG GAGCTGTACG CCAACGTGAA CAACGTCTTC
GACCGCCGCC ACGAGACCTT CGGCGCGCTG GCCGAGACCA TGTTCGACGC CAGCGGCAAC
TACACCGGCG AGGAAGCCGA CGCGCTGTTC GTGGCGCCGG GCACCCCGCG CGCCGTGTTC
GTGGGCCTGC GCTACCGGTT CTGA
|
|---|
| Protein sequence | MTRPLETRPA RPTRLARPAR STPSPITRAL AALGWLGLPL IALPGTAAAQ AAAAQLDRVE
IIGVSPLPGQ GIDRNILPYS TQVLKRDAID GAQAVNQSDY LNRRVVGVQV NEIQGSPFQG
DLTYRGFRAS PLLGAGQGLS VYLDGVRINE PFGDVVNFDL IPEFAINTLS LVPGANPAFG
LNSLGGALAY TTHDGRSAPG FRADLSAGSF GRKRADLSYG RSDDSGWHQY VAVTGFDEDG
WRDHSDGKLG QFFGKLGHDD GTTSWSLGAL YAQSNLVGNG LLPAYTIDDG ALVKDLYFSR
RESVYTFPDQ TRNKLGQLSF NGQHAIDANS SLAALLYVRK SSRSTINGDE AEEEPDDPGD
PNAAFNNTAT TQTGYGAALS YTRVSGAHQW QVGASVDRSR VEYSQYEQEG FFTDRRGVIP
APGEDRELSA NVEGRSTHYG VYATDTWQVA PRTHVTGTAR YNHSTVSNQL TTRDDDTGII
EDKPNERFSY NSVNPALGIA HRLGDAATTP TLFANVARNT RVPTVIELGC ADPDEPCRLP
AGLQADPYLK QVKSTTVEAG LRWPLAPGMR FNLAAFRTDN KDDILFRSTS VTGQLGYFAN
FPKTRNQGVD TEFAVTHGAF DVGIGYSFLK ATYEANGVLR QGERNVTITP GTRIAGLPRH
TLKLAVDWRV GDGLTVGSDL QAVTSRGVSG NEDGLLEDPE VGEDPEYKRV RLPGYAIVNL
RASWKPSAQW ELYANVNNVF DRRHETFGAL AETMFDASGN YTGEEADALF VAPGTPRAVF
VGLRYRF
|
|---|
| |