| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2286 |
|---|
| Symbol | |
|---|
| ID | 4785771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2444656 |
|---|
| End bp | 2446308 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090854 |
|---|
| Product | phenol-degradation regulator |
|---|
| Protein accession | YP_001021477 |
|---|
| Protein GI | 124267473 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGATC CTCTGTCGCT GCTGAGATTC AGTGCGGCAT CCGGGCACAT CTGGCTCGAC
GAGCAGCGCA TGCTGCTGCT GCACGCGCGC GCGCTGGCCG CGCTGCGCAA GGAACTGTTC
GACTCCCTGG GCGTCGAGCG CGCCCGAGGC CTGCTGGTGC GCATGGGCTT CGCTTCCGGC
CGTCACGACG GCGAGCTGGC GGTCAAGCAG CGCGGCAGCG GCAAGAGCAA CGAGGAGGCC
TTCCTGCTCG GGCCGCAGCT GCACGCGCTG GAAGGTGCGG TCAGCGTGGA GAAGGTGGCG
CTCGAGATGG ACCTCGCCAC CGGCCACTTC TTCGGCGACT TCCTGTGGAC CAACTCCTGG
GAGGACGAGG CCAACATCGC CGATTTCGGC TTCGGCGAGG AGCCGGCCTG CTGGACGCAG
ATCGGCTACG CCTCGGGCTA CACCAGCGCC TTCATGGGCC GGCTGGTGGT GTTCAAGGAA
ATGGAATGCC GCAGCCAGGG CGACAGCCGC TGCCGCATCA TCGGCCAGCC AGCCGAGGCC
TGGCGCGACG AGGCCTATCT CAGCTACTTC CGCCCGCAGG TGATCGGTCA GCAGCTGATC
GACTACAGCA TCGGCCTGGA GCAGCTGCGC GCGGTGCAGG CGAGGCGGCA GTACGACCGC
AAGCTGATCG GCGTGTCGCC GGGCTTCCGC GCCGCCTTCG AGCTGCTGCG CAGCGCGGCC
GGCAGCGCGA TCACCGTGCT GCTGCTGGGC GAGACCGGCG TGGGCAAGGA GATGTTCGCG
CGCTGGCTGC ACGAGAACGG CCCGCGCGCC GGCGGCCCGT TCATCGCGGT GAACTGCGCT
GCCATCCCGC ACGAGCTGAT CGAGGCCGAG CTGTTCGGCG TGGAGAAGGG CGCCTACACG
GGGGCACAGC TGGCGCGCGC CGGGCGCTTC GAGCGCGCCA GCGGCGGCAC ACTGTTCCTC
GACGAGGTGG GCGACCTGCC GCTGGCGGCC CAGGTGAAGC TGCTGCGCGC GCTGCAGACC
GCCGAGGTGG AGCGGCTCGG CTCCGAGCAC GCCACCAAGA TCGACGTGCG CATCGTTGCG
GCCACCAATG TCGACCTGCA GCAGGCGATG CAGGCCGGCC GCTTCCGCAG CGACCTGTTC
TACCGGCTCA ACATCTTCCC GATCACCATC CCGCCGCTGC GCGAGCGCAC CACCGACATC
CCGGCGCTGA TCGAGCGCTT CCTGGAGAAA TACGGTGAGC TCTACAACAA GAAACTGCGC
GGCCTGACCG ACAAGGCGAT GCGCCAGGTG CTGAGCCACG CCTGGCCCGG CAACATCCGC
GAGCTGGAGA ATGTGATCGA GCGCGCCGTG CTGCTGGCGC CGGCCAACGG CCCGATCGAG
GCCTGTCACC TGTTCGGTGA ACCGGCGCTG CGCGCCAGCG AGGGCAGCCT GGATGCGAAG
GGCCGCGTGA CCGAGGTCCA CCCCGACGCC CTCGGCCGCC TGTGCGACGA GGCCTTCGAG
CACCACATCG ACCTCGAGTC GCTGGAGCGC CGCATGATGC AGGCGGCGAT GCAGCGCGCC
AAGGGCAACC TGTCGCAGGC CGCGCGCCTG CTCGGCATCA CCCGACCGCA GCTGGCCTAT
CGGCTCAAGA AGGAAGGCCT GCCGACCGGC TGA
|
|---|
| Protein sequence | MGDPLSLLRF SAASGHIWLD EQRMLLLHAR ALAALRKELF DSLGVERARG LLVRMGFASG
RHDGELAVKQ RGSGKSNEEA FLLGPQLHAL EGAVSVEKVA LEMDLATGHF FGDFLWTNSW
EDEANIADFG FGEEPACWTQ IGYASGYTSA FMGRLVVFKE MECRSQGDSR CRIIGQPAEA
WRDEAYLSYF RPQVIGQQLI DYSIGLEQLR AVQARRQYDR KLIGVSPGFR AAFELLRSAA
GSAITVLLLG ETGVGKEMFA RWLHENGPRA GGPFIAVNCA AIPHELIEAE LFGVEKGAYT
GAQLARAGRF ERASGGTLFL DEVGDLPLAA QVKLLRALQT AEVERLGSEH ATKIDVRIVA
ATNVDLQQAM QAGRFRSDLF YRLNIFPITI PPLRERTTDI PALIERFLEK YGELYNKKLR
GLTDKAMRQV LSHAWPGNIR ELENVIERAV LLAPANGPIE ACHLFGEPAL RASEGSLDAK
GRVTEVHPDA LGRLCDEAFE HHIDLESLER RMMQAAMQRA KGNLSQAARL LGITRPQLAY
RLKKEGLPTG
|
|---|
| |